Gene : Thecc1EG016885 T. cacao v1.1
Defline:  (1 of 2) PTHR22939:SF81 - PROTEASE DO-LIKE 1, CHLOROPLASTIC Genomic Order:  100
Name:  ? Thecc1EG016885 Secondary Identifier:  ? PAC:27454966
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016885 0.5kb upstream 0.5kb upstream 4777 true scaffold_4: 662725-667501 Theobroma cacao
Thecc1EG016885 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 662725-663224 Theobroma cacao
Thecc1EG016885 0.5kb downstream 0.5kb downstream 4777 true scaffold_4: 663225-668001 Theobroma cacao
Thecc1EG016885 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 667502-668001 Theobroma cacao
Thecc1EG016885 1.0kb upstream 1.0kb upstream 5277 true scaffold_4: 662225-667501 Theobroma cacao
Thecc1EG016885 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 662225-663224 Theobroma cacao
Thecc1EG016885 1.0kb downstream 1.0kb downstream 5277 true scaffold_4: 663225-668501 Theobroma cacao
Thecc1EG016885 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 667502-668501 Theobroma cacao
Thecc1EG016885 2.0kb upstream 2.0kb upstream 6277 true scaffold_4: 661225-667501 Theobroma cacao
Thecc1EG016885 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 661225-663224 Theobroma cacao
Thecc1EG016885 2.0kb downstream 2.0kb downstream 6277 true scaffold_4: 663225-669501 Theobroma cacao
Thecc1EG016885 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 667502-669501 Theobroma cacao
Thecc1EG016885 5.0kb upstream 5.0kb upstream 9277 true scaffold_4: 658225-667501 Theobroma cacao
Thecc1EG016885 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 658225-663224 Theobroma cacao
Thecc1EG016885 5.0kb downstream 5.0kb downstream 9277 true scaffold_4: 663225-672501 Theobroma cacao
Thecc1EG016885 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 667502-672501 Theobroma cacao
Thecc1EG016885 10.0kb upstream 10.0kb upstream 14277 true scaffold_4: 653225-667501 Theobroma cacao
Thecc1EG016885 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 653225-663224 Theobroma cacao
Thecc1EG016885 10.0kb downstream 10.0kb downstream 14277 true scaffold_4: 663225-677501 Theobroma cacao
Thecc1EG016885 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 667502-677501 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831953 5264 Brassicales-Malvales View MSA
124341651 5266 SBM View MSA
124240177 5268 Malvidae View MSA
124067887 5270 Rosid View MSA
123737720 5271 Pentapetalae View MSA
122794444 5272 Eudicot View MSA
122046956 5273 Angiosperm View MSA
121350502 5274 Embryophyte View MSA
123427247 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain