Gene : Thecc1EG016864 T. cacao v1.1
Defline:  (1 of 1) PTHR24326:SF136 - HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-54-RELATED Genomic Order:  80
Name:  ? Thecc1EG016864 Secondary Identifier:  ? PAC:27452787
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016864 0.5kb upstream 0.5kb upstream 2917 true scaffold_4: 558618-561534 Theobroma cacao
Thecc1EG016864 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 561035-561534 Theobroma cacao
Thecc1EG016864 0.5kb downstream 0.5kb downstream 2917 true scaffold_4: 558118-561034 Theobroma cacao
Thecc1EG016864 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 558118-558617 Theobroma cacao
Thecc1EG016864 1.0kb upstream 1.0kb upstream 3417 true scaffold_4: 558618-562034 Theobroma cacao
Thecc1EG016864 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 561035-562034 Theobroma cacao
Thecc1EG016864 1.0kb downstream 1.0kb downstream 3417 true scaffold_4: 557618-561034 Theobroma cacao
Thecc1EG016864 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 557618-558617 Theobroma cacao
Thecc1EG016864 2.0kb upstream 2.0kb upstream 4417 true scaffold_4: 558618-563034 Theobroma cacao
Thecc1EG016864 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 561035-563034 Theobroma cacao
Thecc1EG016864 2.0kb downstream 2.0kb downstream 4417 true scaffold_4: 556618-561034 Theobroma cacao
Thecc1EG016864 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 556618-558617 Theobroma cacao
Thecc1EG016864 5.0kb upstream 5.0kb upstream 7417 true scaffold_4: 558618-566034 Theobroma cacao
Thecc1EG016864 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 561035-566034 Theobroma cacao
Thecc1EG016864 5.0kb downstream 5.0kb downstream 7417 true scaffold_4: 553618-561034 Theobroma cacao
Thecc1EG016864 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 553618-558617 Theobroma cacao
Thecc1EG016864 10.0kb upstream 10.0kb upstream 12417 true scaffold_4: 558618-571034 Theobroma cacao
Thecc1EG016864 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 561035-571034 Theobroma cacao
Thecc1EG016864 10.0kb downstream 10.0kb downstream 12417 true scaffold_4: 548618-561034 Theobroma cacao
Thecc1EG016864 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 548618-558617 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841004 5264 Brassicales-Malvales View MSA
124347057 5266 SBM View MSA
124248110 5268 Malvidae View MSA
124070886 5270 Rosid View MSA
123751160 5271 Pentapetalae View MSA
122797641 5272 Eudicot View MSA
122048587 5273 Angiosperm View MSA
121351579 5274 Embryophyte View MSA
123382235 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain