Gene : Thecc1EG016860 T. cacao v1.1

Defline:  (1 of 1) PTHR11926:SF250 - UDP-GLYCOSYLTRANSFERASE 90A1-RELATED Genomic Order:  77
Name:  ? Thecc1EG016860 Secondary Identifier:  ? PAC:27451845

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016860 0.5kb upstream 0.5kb upstream 7081 true scaffold_4: 529743-536823 Theobroma cacao
Thecc1EG016860 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 536324-536823 Theobroma cacao
Thecc1EG016860 0.5kb downstream 0.5kb downstream 7081 true scaffold_4: 529243-536323 Theobroma cacao
Thecc1EG016860 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 529243-529742 Theobroma cacao
Thecc1EG016860 1.0kb upstream 1.0kb upstream 7581 true scaffold_4: 529743-537323 Theobroma cacao
Thecc1EG016860 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 536324-537323 Theobroma cacao
Thecc1EG016860 1.0kb downstream 1.0kb downstream 7581 true scaffold_4: 528743-536323 Theobroma cacao
Thecc1EG016860 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 528743-529742 Theobroma cacao
Thecc1EG016860 2.0kb upstream 2.0kb upstream 8581 true scaffold_4: 529743-538323 Theobroma cacao
Thecc1EG016860 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 536324-538323 Theobroma cacao
Thecc1EG016860 2.0kb downstream 2.0kb downstream 8581 true scaffold_4: 527743-536323 Theobroma cacao
Thecc1EG016860 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 527743-529742 Theobroma cacao
Thecc1EG016860 5.0kb upstream 5.0kb upstream 11581 true scaffold_4: 529743-541323 Theobroma cacao
Thecc1EG016860 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 536324-541323 Theobroma cacao
Thecc1EG016860 5.0kb downstream 5.0kb downstream 11581 true scaffold_4: 524743-536323 Theobroma cacao
Thecc1EG016860 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 524743-529742 Theobroma cacao
Thecc1EG016860 10.0kb upstream 10.0kb upstream 16581 true scaffold_4: 529743-546323 Theobroma cacao
Thecc1EG016860 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 536324-546323 Theobroma cacao
Thecc1EG016860 10.0kb downstream 10.0kb downstream 16581 true scaffold_4: 519743-536323 Theobroma cacao
Thecc1EG016860 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 519743-529742 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841672 5264 Brassicales-Malvales View MSA
124346707 5266 SBM View MSA
124244822 5268 Malvidae View MSA
124061454 5270 Rosid View MSA
123745645 5271 Pentapetalae View MSA
122796365 5272 Eudicot View MSA
122051696 5273 Angiosperm View MSA
121351097 5274 Embryophyte View MSA
123428681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain