Gene : Thecc1EG016814 T. cacao v1.1
Defline:  (1 of 3) PTHR31517:SF11 - PEROXIDASE 31-RELATED Genomic Order:  38
Name:  ? Thecc1EG016814 Secondary Identifier:  ? PAC:27455863
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5466 Theobroma cacao pathologic  
Tcacao PWY-6824 Theobroma cacao pathologic  
Tcacao PWY-7214 Theobroma cacao pathologic  
Tcacao PWY-7445 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016814 0.5kb upstream 0.5kb upstream 1885 true scaffold_4: 324124-326008 Theobroma cacao
Thecc1EG016814 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 325509-326008 Theobroma cacao
Thecc1EG016814 0.5kb downstream 0.5kb downstream 1885 true scaffold_4: 323624-325508 Theobroma cacao
Thecc1EG016814 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 323624-324123 Theobroma cacao
Thecc1EG016814 1.0kb upstream 1.0kb upstream 2385 true scaffold_4: 324124-326508 Theobroma cacao
Thecc1EG016814 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 325509-326508 Theobroma cacao
Thecc1EG016814 1.0kb downstream 1.0kb downstream 2385 true scaffold_4: 323124-325508 Theobroma cacao
Thecc1EG016814 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 323124-324123 Theobroma cacao
Thecc1EG016814 2.0kb upstream 2.0kb upstream 3385 true scaffold_4: 324124-327508 Theobroma cacao
Thecc1EG016814 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 325509-327508 Theobroma cacao
Thecc1EG016814 2.0kb downstream 2.0kb downstream 3385 true scaffold_4: 322124-325508 Theobroma cacao
Thecc1EG016814 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 322124-324123 Theobroma cacao
Thecc1EG016814 5.0kb upstream 5.0kb upstream 6385 true scaffold_4: 324124-330508 Theobroma cacao
Thecc1EG016814 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 325509-330508 Theobroma cacao
Thecc1EG016814 5.0kb downstream 5.0kb downstream 6385 true scaffold_4: 319124-325508 Theobroma cacao
Thecc1EG016814 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 319124-324123 Theobroma cacao
Thecc1EG016814 10.0kb upstream 10.0kb upstream 11385 true scaffold_4: 324124-335508 Theobroma cacao
Thecc1EG016814 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 325509-335508 Theobroma cacao
Thecc1EG016814 10.0kb downstream 10.0kb downstream 11385 true scaffold_4: 314124-325508 Theobroma cacao
Thecc1EG016814 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 314124-324123 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835779 5264 Brassicales-Malvales View MSA
124346299 5266 SBM View MSA
124240815 5268 Malvidae View MSA
124069813 5270 Rosid View MSA
123741716 5271 Pentapetalae View MSA
122795989 5272 Eudicot View MSA
122048017 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain