Gene : Thecc1EG016792 T. cacao v1.1

Defline:  (1 of 215) PF00249 - Myb-like DNA-binding domain (Myb_DNA-binding) Genomic Order:  22
Name:  ? Thecc1EG016792 Secondary Identifier:  ? PAC:27456230

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016792 0.5kb upstream 0.5kb upstream 7919 true scaffold_4: 205977-213895 Theobroma cacao
Thecc1EG016792 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 213396-213895 Theobroma cacao
Thecc1EG016792 0.5kb downstream 0.5kb downstream 7919 true scaffold_4: 205477-213395 Theobroma cacao
Thecc1EG016792 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 205477-205976 Theobroma cacao
Thecc1EG016792 1.0kb upstream 1.0kb upstream 8419 true scaffold_4: 205977-214395 Theobroma cacao
Thecc1EG016792 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 213396-214395 Theobroma cacao
Thecc1EG016792 1.0kb downstream 1.0kb downstream 8419 true scaffold_4: 204977-213395 Theobroma cacao
Thecc1EG016792 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 204977-205976 Theobroma cacao
Thecc1EG016792 2.0kb upstream 2.0kb upstream 9419 true scaffold_4: 205977-215395 Theobroma cacao
Thecc1EG016792 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 213396-215395 Theobroma cacao
Thecc1EG016792 2.0kb downstream 2.0kb downstream 9419 true scaffold_4: 203977-213395 Theobroma cacao
Thecc1EG016792 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 203977-205976 Theobroma cacao
Thecc1EG016792 5.0kb upstream 5.0kb upstream 12419 true scaffold_4: 205977-218395 Theobroma cacao
Thecc1EG016792 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 213396-218395 Theobroma cacao
Thecc1EG016792 5.0kb downstream 5.0kb downstream 12419 true scaffold_4: 200977-213395 Theobroma cacao
Thecc1EG016792 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 200977-205976 Theobroma cacao
Thecc1EG016792 10.0kb upstream 10.0kb upstream 17419 true scaffold_4: 205977-223395 Theobroma cacao
Thecc1EG016792 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 213396-223395 Theobroma cacao
Thecc1EG016792 10.0kb downstream 10.0kb downstream 17419 true scaffold_4: 195977-213395 Theobroma cacao
Thecc1EG016792 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 195977-205976 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836845 5264 Brassicales-Malvales View MSA
124322214 5266 SBM View MSA
124254020 5268 Malvidae View MSA
124062030 5270 Rosid View MSA
123747856 5271 Pentapetalae View MSA
122786370 5272 Eudicot View MSA
122051060 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121349698 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain