Gene : Thecc1EG017048 T. cacao v1.1

Defline:  (1 of 106) PF02365 - No apical meristem (NAM) protein (NAM) Genomic Order:  245
Name:  ? Thecc1EG017048 Secondary Identifier:  ? PAC:27452192

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG017048 0.5kb upstream 0.5kb upstream 3544 true scaffold_4: 1569673-1573216 Theobroma cacao
Thecc1EG017048 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 1569673-1570172 Theobroma cacao
Thecc1EG017048 0.5kb downstream 0.5kb downstream 3544 true scaffold_4: 1570173-1573716 Theobroma cacao
Thecc1EG017048 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 1573217-1573716 Theobroma cacao
Thecc1EG017048 1.0kb upstream 1.0kb upstream 4044 true scaffold_4: 1569173-1573216 Theobroma cacao
Thecc1EG017048 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 1569173-1570172 Theobroma cacao
Thecc1EG017048 1.0kb downstream 1.0kb downstream 4044 true scaffold_4: 1570173-1574216 Theobroma cacao
Thecc1EG017048 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 1573217-1574216 Theobroma cacao
Thecc1EG017048 2.0kb upstream 2.0kb upstream 5044 true scaffold_4: 1568173-1573216 Theobroma cacao
Thecc1EG017048 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 1568173-1570172 Theobroma cacao
Thecc1EG017048 2.0kb downstream 2.0kb downstream 5044 true scaffold_4: 1570173-1575216 Theobroma cacao
Thecc1EG017048 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 1573217-1575216 Theobroma cacao
Thecc1EG017048 5.0kb upstream 5.0kb upstream 8044 true scaffold_4: 1565173-1573216 Theobroma cacao
Thecc1EG017048 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 1565173-1570172 Theobroma cacao
Thecc1EG017048 5.0kb downstream 5.0kb downstream 8044 true scaffold_4: 1570173-1578216 Theobroma cacao
Thecc1EG017048 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 1573217-1578216 Theobroma cacao
Thecc1EG017048 10.0kb upstream 10.0kb upstream 13044 true scaffold_4: 1560173-1573216 Theobroma cacao
Thecc1EG017048 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 1560173-1570172 Theobroma cacao
Thecc1EG017048 10.0kb downstream 10.0kb downstream 13044 true scaffold_4: 1570173-1583216 Theobroma cacao
Thecc1EG017048 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 1573217-1583216 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825000 5264 Brassicales-Malvales View MSA
124351770 5266 SBM View MSA
124253342 5268 Malvidae View MSA
124073717 5270 Rosid View MSA
123753355 5271 Pentapetalae View MSA
122797864 5272 Eudicot View MSA
122051475 5273 Angiosperm View MSA
121312510 5274 Embryophyte View MSA
123349677 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain