Gene : Thecc1EG017024 T. cacao v1.1
Defline:  (1 of 1) PTHR11728:SF8 - GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD(+)], CYTOPLASMIC Genomic Order:  224
Name:  ? Thecc1EG017024 Secondary Identifier:  ? PAC:27452977
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6118 Theobroma cacao pathologic  
Tcacao PWY-7411 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG017024 0.5kb upstream 0.5kb upstream 4611 true scaffold_4: 1421032-1425642 Theobroma cacao
Thecc1EG017024 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 1425143-1425642 Theobroma cacao
Thecc1EG017024 0.5kb downstream 0.5kb downstream 4611 true scaffold_4: 1420532-1425142 Theobroma cacao
Thecc1EG017024 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 1420532-1421031 Theobroma cacao
Thecc1EG017024 1.0kb upstream 1.0kb upstream 5111 true scaffold_4: 1421032-1426142 Theobroma cacao
Thecc1EG017024 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 1425143-1426142 Theobroma cacao
Thecc1EG017024 1.0kb downstream 1.0kb downstream 5111 true scaffold_4: 1420032-1425142 Theobroma cacao
Thecc1EG017024 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 1420032-1421031 Theobroma cacao
Thecc1EG017024 2.0kb upstream 2.0kb upstream 6111 true scaffold_4: 1421032-1427142 Theobroma cacao
Thecc1EG017024 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 1425143-1427142 Theobroma cacao
Thecc1EG017024 2.0kb downstream 2.0kb downstream 6111 true scaffold_4: 1419032-1425142 Theobroma cacao
Thecc1EG017024 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 1419032-1421031 Theobroma cacao
Thecc1EG017024 5.0kb upstream 5.0kb upstream 9111 true scaffold_4: 1421032-1430142 Theobroma cacao
Thecc1EG017024 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 1425143-1430142 Theobroma cacao
Thecc1EG017024 5.0kb downstream 5.0kb downstream 9111 true scaffold_4: 1416032-1425142 Theobroma cacao
Thecc1EG017024 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 1416032-1421031 Theobroma cacao
Thecc1EG017024 10.0kb upstream 10.0kb upstream 14111 true scaffold_4: 1421032-1435142 Theobroma cacao
Thecc1EG017024 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 1425143-1435142 Theobroma cacao
Thecc1EG017024 10.0kb downstream 10.0kb downstream 14111 true scaffold_4: 1411032-1425142 Theobroma cacao
Thecc1EG017024 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 1411032-1421031 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832123 5264 Brassicales-Malvales View MSA
124342292 5266 SBM View MSA
124243954 5268 Malvidae View MSA
124071828 5270 Rosid View MSA
123739883 5271 Pentapetalae View MSA
122793723 5272 Eudicot View MSA
122048104 5273 Angiosperm View MSA
121348116 5274 Embryophyte View MSA
123428470 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain