Gene : Thecc1EG017017 T. cacao v1.1
Defline:  (1 of 689) 2.7.7.49 - RNA-directed DNA polymerase / Revertase Genomic Order:  218
Name:  ? Thecc1EG017017 Secondary Identifier:  ? PAC:27455484
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG017017 0.5kb upstream 0.5kb upstream 1170 true scaffold_4: 1386476-1387645 Theobroma cacao
Thecc1EG017017 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 1387146-1387645 Theobroma cacao
Thecc1EG017017 0.5kb downstream 0.5kb downstream 1170 true scaffold_4: 1385976-1387145 Theobroma cacao
Thecc1EG017017 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 1385976-1386475 Theobroma cacao
Thecc1EG017017 1.0kb upstream 1.0kb upstream 1670 true scaffold_4: 1386476-1388145 Theobroma cacao
Thecc1EG017017 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 1387146-1388145 Theobroma cacao
Thecc1EG017017 1.0kb downstream 1.0kb downstream 1670 true scaffold_4: 1385476-1387145 Theobroma cacao
Thecc1EG017017 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 1385476-1386475 Theobroma cacao
Thecc1EG017017 2.0kb upstream 2.0kb upstream 2670 true scaffold_4: 1386476-1389145 Theobroma cacao
Thecc1EG017017 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 1387146-1389145 Theobroma cacao
Thecc1EG017017 2.0kb downstream 2.0kb downstream 2670 true scaffold_4: 1384476-1387145 Theobroma cacao
Thecc1EG017017 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 1384476-1386475 Theobroma cacao
Thecc1EG017017 5.0kb upstream 5.0kb upstream 5670 true scaffold_4: 1386476-1392145 Theobroma cacao
Thecc1EG017017 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 1387146-1392145 Theobroma cacao
Thecc1EG017017 5.0kb downstream 5.0kb downstream 5670 true scaffold_4: 1381476-1387145 Theobroma cacao
Thecc1EG017017 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 1381476-1386475 Theobroma cacao
Thecc1EG017017 10.0kb upstream 10.0kb upstream 10670 true scaffold_4: 1386476-1397145 Theobroma cacao
Thecc1EG017017 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 1387146-1397145 Theobroma cacao
Thecc1EG017017 10.0kb downstream 10.0kb downstream 10670 true scaffold_4: 1376476-1387145 Theobroma cacao
Thecc1EG017017 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 1376476-1386475 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121521853 5273 Angiosperm Singleton cluster - no MSA
123819648 5264 Brassicales-Malvales Singleton cluster - no MSA
124315892 5266 SBM Singleton cluster - no MSA
124164758 5268 Malvidae Singleton cluster - no MSA
123888492 5270 Rosid Singleton cluster - no MSA
123470917 5271 Pentapetalae Singleton cluster - no MSA
122506208 5272 Eudicot Singleton cluster - no MSA
120794656 5274 Embryophyte Singleton cluster - no MSA
122836252 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain