Gene : Thecc1EG017002 T. cacao v1.1
Defline:  (1 of 4) 3.1.31.1 - Micrococcal nuclease / Micrococcal endonuclease Genomic Order:  204
Name:  ? Thecc1EG017002 Secondary Identifier:  ? PAC:27453926
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG017002 0.5kb upstream 0.5kb upstream 2841 true scaffold_4: 1324371-1327211 Theobroma cacao
Thecc1EG017002 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 1326712-1327211 Theobroma cacao
Thecc1EG017002 0.5kb downstream 0.5kb downstream 2841 true scaffold_4: 1323871-1326711 Theobroma cacao
Thecc1EG017002 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 1323871-1324370 Theobroma cacao
Thecc1EG017002 1.0kb upstream 1.0kb upstream 3341 true scaffold_4: 1324371-1327711 Theobroma cacao
Thecc1EG017002 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 1326712-1327711 Theobroma cacao
Thecc1EG017002 1.0kb downstream 1.0kb downstream 3341 true scaffold_4: 1323371-1326711 Theobroma cacao
Thecc1EG017002 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 1323371-1324370 Theobroma cacao
Thecc1EG017002 2.0kb upstream 2.0kb upstream 4341 true scaffold_4: 1324371-1328711 Theobroma cacao
Thecc1EG017002 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 1326712-1328711 Theobroma cacao
Thecc1EG017002 2.0kb downstream 2.0kb downstream 4341 true scaffold_4: 1322371-1326711 Theobroma cacao
Thecc1EG017002 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 1322371-1324370 Theobroma cacao
Thecc1EG017002 5.0kb upstream 5.0kb upstream 7341 true scaffold_4: 1324371-1331711 Theobroma cacao
Thecc1EG017002 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 1326712-1331711 Theobroma cacao
Thecc1EG017002 5.0kb downstream 5.0kb downstream 7341 true scaffold_4: 1319371-1326711 Theobroma cacao
Thecc1EG017002 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 1319371-1324370 Theobroma cacao
Thecc1EG017002 10.0kb upstream 10.0kb upstream 12341 true scaffold_4: 1324371-1336711 Theobroma cacao
Thecc1EG017002 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 1326712-1336711 Theobroma cacao
Thecc1EG017002 10.0kb downstream 10.0kb downstream 12341 true scaffold_4: 1314371-1326711 Theobroma cacao
Thecc1EG017002 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 1314371-1324370 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837266 5264 Brassicales-Malvales View MSA
124336763 5266 SBM View MSA
124243728 5268 Malvidae View MSA
124062964 5270 Rosid View MSA
123736698 5271 Pentapetalae View MSA
122792401 5272 Eudicot View MSA
122046760 5273 Angiosperm View MSA
121347603 5274 Embryophyte View MSA
123428455 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain