Gene : Thecc1EG016993 T. cacao v1.1
Defline:  (1 of 1) K11364 - SAGA-associated factor 29 (SGF29) Genomic Order:  196
Name:  ? Thecc1EG016993 Secondary Identifier:  ? PAC:27451641
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016993 0.5kb upstream 0.5kb upstream 8555 true scaffold_4: 1297041-1305595 Theobroma cacao
Thecc1EG016993 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 1297041-1297540 Theobroma cacao
Thecc1EG016993 0.5kb downstream 0.5kb downstream 8555 true scaffold_4: 1297541-1306095 Theobroma cacao
Thecc1EG016993 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 1305596-1306095 Theobroma cacao
Thecc1EG016993 1.0kb upstream 1.0kb upstream 9055 true scaffold_4: 1296541-1305595 Theobroma cacao
Thecc1EG016993 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 1296541-1297540 Theobroma cacao
Thecc1EG016993 1.0kb downstream 1.0kb downstream 9055 true scaffold_4: 1297541-1306595 Theobroma cacao
Thecc1EG016993 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 1305596-1306595 Theobroma cacao
Thecc1EG016993 2.0kb upstream 2.0kb upstream 10055 true scaffold_4: 1295541-1305595 Theobroma cacao
Thecc1EG016993 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 1295541-1297540 Theobroma cacao
Thecc1EG016993 2.0kb downstream 2.0kb downstream 10055 true scaffold_4: 1297541-1307595 Theobroma cacao
Thecc1EG016993 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 1305596-1307595 Theobroma cacao
Thecc1EG016993 5.0kb upstream 5.0kb upstream 13055 true scaffold_4: 1292541-1305595 Theobroma cacao
Thecc1EG016993 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 1292541-1297540 Theobroma cacao
Thecc1EG016993 5.0kb downstream 5.0kb downstream 13055 true scaffold_4: 1297541-1310595 Theobroma cacao
Thecc1EG016993 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 1305596-1310595 Theobroma cacao
Thecc1EG016993 10.0kb upstream 10.0kb upstream 18055 true scaffold_4: 1287541-1305595 Theobroma cacao
Thecc1EG016993 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 1287541-1297540 Theobroma cacao
Thecc1EG016993 10.0kb downstream 10.0kb downstream 18055 true scaffold_4: 1297541-1315595 Theobroma cacao
Thecc1EG016993 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 1305596-1315595 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830451 5264 Brassicales-Malvales View MSA
124343013 5266 SBM View MSA
124254161 5268 Malvidae View MSA
124061243 5270 Rosid View MSA
123747151 5271 Pentapetalae View MSA
122789901 5272 Eudicot View MSA
122042873 5273 Angiosperm View MSA
121345271 5274 Embryophyte View MSA
123380184 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain