Gene : Thecc1EG017279 T. cacao v1.1
Defline:  (1 of 3) PTHR10910//PTHR10910:SF109 - EUKARYOTE SPECIFIC DSRNA BINDING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  415
Name:  ? Thecc1EG017279 Secondary Identifier:  ? PAC:27453401
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG017279 0.5kb upstream 0.5kb upstream 3359 true scaffold_4: 2766811-2770169 Theobroma cacao
Thecc1EG017279 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 2766811-2767310 Theobroma cacao
Thecc1EG017279 0.5kb downstream 0.5kb downstream 3359 true scaffold_4: 2767311-2770669 Theobroma cacao
Thecc1EG017279 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 2770170-2770669 Theobroma cacao
Thecc1EG017279 1.0kb upstream 1.0kb upstream 3859 true scaffold_4: 2766311-2770169 Theobroma cacao
Thecc1EG017279 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 2766311-2767310 Theobroma cacao
Thecc1EG017279 1.0kb downstream 1.0kb downstream 3859 true scaffold_4: 2767311-2771169 Theobroma cacao
Thecc1EG017279 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 2770170-2771169 Theobroma cacao
Thecc1EG017279 2.0kb upstream 2.0kb upstream 4859 true scaffold_4: 2765311-2770169 Theobroma cacao
Thecc1EG017279 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 2765311-2767310 Theobroma cacao
Thecc1EG017279 2.0kb downstream 2.0kb downstream 4859 true scaffold_4: 2767311-2772169 Theobroma cacao
Thecc1EG017279 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 2770170-2772169 Theobroma cacao
Thecc1EG017279 5.0kb upstream 5.0kb upstream 7859 true scaffold_4: 2762311-2770169 Theobroma cacao
Thecc1EG017279 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 2762311-2767310 Theobroma cacao
Thecc1EG017279 5.0kb downstream 5.0kb downstream 7859 true scaffold_4: 2767311-2775169 Theobroma cacao
Thecc1EG017279 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 2770170-2775169 Theobroma cacao
Thecc1EG017279 10.0kb upstream 10.0kb upstream 12859 true scaffold_4: 2757311-2770169 Theobroma cacao
Thecc1EG017279 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 2757311-2767310 Theobroma cacao
Thecc1EG017279 10.0kb downstream 10.0kb downstream 12859 true scaffold_4: 2767311-2780169 Theobroma cacao
Thecc1EG017279 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 2770170-2780169 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827274 5264 Brassicales-Malvales View MSA
124321417 5266 SBM View MSA
124252447 5268 Malvidae View MSA
124069666 5270 Rosid View MSA
123748285 5271 Pentapetalae View MSA
122797580 5272 Eudicot View MSA
122051528 5273 Angiosperm View MSA
121350362 5274 Embryophyte View MSA
123381695 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain