Gene : Thecc1EG017269 T. cacao v1.1
Defline:  (1 of 46) PF03514 - GRAS domain family (GRAS) Genomic Order:  405
Name:  ? Thecc1EG017269 Secondary Identifier:  ? PAC:27453133
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG017269 0.5kb upstream 0.5kb upstream 4250 true scaffold_4: 2691515-2695764 Theobroma cacao
Thecc1EG017269 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 2691515-2692014 Theobroma cacao
Thecc1EG017269 0.5kb downstream 0.5kb downstream 4250 true scaffold_4: 2692015-2696264 Theobroma cacao
Thecc1EG017269 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 2695765-2696264 Theobroma cacao
Thecc1EG017269 1.0kb upstream 1.0kb upstream 4750 true scaffold_4: 2691015-2695764 Theobroma cacao
Thecc1EG017269 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 2691015-2692014 Theobroma cacao
Thecc1EG017269 1.0kb downstream 1.0kb downstream 4750 true scaffold_4: 2692015-2696764 Theobroma cacao
Thecc1EG017269 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 2695765-2696764 Theobroma cacao
Thecc1EG017269 2.0kb upstream 2.0kb upstream 5750 true scaffold_4: 2690015-2695764 Theobroma cacao
Thecc1EG017269 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 2690015-2692014 Theobroma cacao
Thecc1EG017269 2.0kb downstream 2.0kb downstream 5750 true scaffold_4: 2692015-2697764 Theobroma cacao
Thecc1EG017269 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 2695765-2697764 Theobroma cacao
Thecc1EG017269 5.0kb upstream 5.0kb upstream 8750 true scaffold_4: 2687015-2695764 Theobroma cacao
Thecc1EG017269 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 2687015-2692014 Theobroma cacao
Thecc1EG017269 5.0kb downstream 5.0kb downstream 8750 true scaffold_4: 2692015-2700764 Theobroma cacao
Thecc1EG017269 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 2695765-2700764 Theobroma cacao
Thecc1EG017269 10.0kb upstream 10.0kb upstream 13750 true scaffold_4: 2682015-2695764 Theobroma cacao
Thecc1EG017269 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 2682015-2692014 Theobroma cacao
Thecc1EG017269 10.0kb downstream 10.0kb downstream 13750 true scaffold_4: 2692015-2705764 Theobroma cacao
Thecc1EG017269 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 2695765-2705764 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826849 5264 Brassicales-Malvales View MSA
124347703 5266 SBM View MSA
124246628 5268 Malvidae View MSA
124069982 5270 Rosid View MSA
123747383 5271 Pentapetalae View MSA
122797563 5272 Eudicot View MSA
122051595 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain