Gene : Thecc1EG017229 T. cacao v1.1
Defline:  (1 of 3) PTHR31517//PTHR31517:SF7 - FAMILY NOT NAMED // PEROXIDASE 55 Genomic Order:  374
Name:  ? Thecc1EG017229 Secondary Identifier:  ? PAC:27454680
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5466 Theobroma cacao pathologic  
Tcacao PWY-6824 Theobroma cacao pathologic  
Tcacao PWY-7214 Theobroma cacao pathologic  
Tcacao PWY-7445 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG017229 0.5kb upstream 0.5kb upstream 2554 true scaffold_4: 2431536-2434089 Theobroma cacao
Thecc1EG017229 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 2431536-2432035 Theobroma cacao
Thecc1EG017229 0.5kb downstream 0.5kb downstream 2554 true scaffold_4: 2432036-2434589 Theobroma cacao
Thecc1EG017229 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 2434090-2434589 Theobroma cacao
Thecc1EG017229 1.0kb upstream 1.0kb upstream 3054 true scaffold_4: 2431036-2434089 Theobroma cacao
Thecc1EG017229 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 2431036-2432035 Theobroma cacao
Thecc1EG017229 1.0kb downstream 1.0kb downstream 3054 true scaffold_4: 2432036-2435089 Theobroma cacao
Thecc1EG017229 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 2434090-2435089 Theobroma cacao
Thecc1EG017229 2.0kb upstream 2.0kb upstream 4054 true scaffold_4: 2430036-2434089 Theobroma cacao
Thecc1EG017229 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 2430036-2432035 Theobroma cacao
Thecc1EG017229 2.0kb downstream 2.0kb downstream 4054 true scaffold_4: 2432036-2436089 Theobroma cacao
Thecc1EG017229 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 2434090-2436089 Theobroma cacao
Thecc1EG017229 5.0kb upstream 5.0kb upstream 7054 true scaffold_4: 2427036-2434089 Theobroma cacao
Thecc1EG017229 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 2427036-2432035 Theobroma cacao
Thecc1EG017229 5.0kb downstream 5.0kb downstream 7054 true scaffold_4: 2432036-2439089 Theobroma cacao
Thecc1EG017229 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 2434090-2439089 Theobroma cacao
Thecc1EG017229 10.0kb upstream 10.0kb upstream 12054 true scaffold_4: 2422036-2434089 Theobroma cacao
Thecc1EG017229 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 2422036-2432035 Theobroma cacao
Thecc1EG017229 10.0kb downstream 10.0kb downstream 12054 true scaffold_4: 2432036-2444089 Theobroma cacao
Thecc1EG017229 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 2434090-2444089 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838119 5264 Brassicales-Malvales View MSA
124338503 5266 SBM View MSA
124244049 5268 Malvidae View MSA
124074838 5270 Rosid View MSA
123752607 5271 Pentapetalae View MSA
122796741 5272 Eudicot View MSA
122051577 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain