Gene : Thecc1EG017203 T. cacao v1.1
Defline:  (1 of 2) K10808 - ribonucleoside-diphosphate reductase subunit M2 (RRM2) Genomic Order:  358
Name:  ? Thecc1EG017203 Secondary Identifier:  ? PAC:27452817
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Sequence Feature Displayer

Ontology Annotation Displayer

12 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6126 Theobroma cacao pathologic  
Tcacao PWY-6545 Theobroma cacao pathologic  
Tcacao PWY-7184 Theobroma cacao pathologic  
Tcacao PWY-7210 Theobroma cacao pathologic  
Tcacao PWY-7211 Theobroma cacao pathologic  
Tcacao PWY-7220 Theobroma cacao pathologic  
Tcacao PWY-7222 Theobroma cacao pathologic  
Tcacao PWY-7226 Theobroma cacao pathologic  
Tcacao PWY-7227 Theobroma cacao pathologic  
Tcacao PWY-7228 Theobroma cacao pathologic  
Tcacao PWY-7229 Theobroma cacao pathologic  
Tcacao PWY-841 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG017203 0.5kb upstream 0.5kb upstream 1955 true scaffold_4: 2336531-2338485 Theobroma cacao
Thecc1EG017203 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 2336531-2337030 Theobroma cacao
Thecc1EG017203 0.5kb downstream 0.5kb downstream 1955 true scaffold_4: 2337031-2338985 Theobroma cacao
Thecc1EG017203 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 2338486-2338985 Theobroma cacao
Thecc1EG017203 1.0kb upstream 1.0kb upstream 2455 true scaffold_4: 2336031-2338485 Theobroma cacao
Thecc1EG017203 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 2336031-2337030 Theobroma cacao
Thecc1EG017203 1.0kb downstream 1.0kb downstream 2455 true scaffold_4: 2337031-2339485 Theobroma cacao
Thecc1EG017203 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 2338486-2339485 Theobroma cacao
Thecc1EG017203 2.0kb upstream 2.0kb upstream 3455 true scaffold_4: 2335031-2338485 Theobroma cacao
Thecc1EG017203 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 2335031-2337030 Theobroma cacao
Thecc1EG017203 2.0kb downstream 2.0kb downstream 3455 true scaffold_4: 2337031-2340485 Theobroma cacao
Thecc1EG017203 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 2338486-2340485 Theobroma cacao
Thecc1EG017203 5.0kb upstream 5.0kb upstream 6455 true scaffold_4: 2332031-2338485 Theobroma cacao
Thecc1EG017203 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 2332031-2337030 Theobroma cacao
Thecc1EG017203 5.0kb downstream 5.0kb downstream 6455 true scaffold_4: 2337031-2343485 Theobroma cacao
Thecc1EG017203 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 2338486-2343485 Theobroma cacao
Thecc1EG017203 10.0kb upstream 10.0kb upstream 11455 true scaffold_4: 2327031-2338485 Theobroma cacao
Thecc1EG017203 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 2327031-2337030 Theobroma cacao
Thecc1EG017203 10.0kb downstream 10.0kb downstream 11455 true scaffold_4: 2337031-2348485 Theobroma cacao
Thecc1EG017203 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 2338486-2348485 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832091 5264 Brassicales-Malvales View MSA
124342160 5266 SBM View MSA
124244448 5268 Malvidae View MSA
124067883 5270 Rosid View MSA
123737275 5271 Pentapetalae View MSA
122787137 5272 Eudicot View MSA
122041688 5273 Angiosperm View MSA
121344906 5274 Embryophyte View MSA
123428543 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain