Gene : Thecc1EG017175 T. cacao v1.1
Defline:  (1 of 1) PTHR11061//PTHR11061:SF29 - RNA M5U METHYLTRANSFERASE FAMILY // SUBFAMILY NOT NAMED Genomic Order:  335
Name:  ? Thecc1EG017175 Secondary Identifier:  ? PAC:27451750
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG017175 0.5kb upstream 0.5kb upstream 5085 true scaffold_4: 2221548-2226632 Theobroma cacao
Thecc1EG017175 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 2221548-2222047 Theobroma cacao
Thecc1EG017175 0.5kb downstream 0.5kb downstream 5085 true scaffold_4: 2222048-2227132 Theobroma cacao
Thecc1EG017175 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 2226633-2227132 Theobroma cacao
Thecc1EG017175 1.0kb upstream 1.0kb upstream 5585 true scaffold_4: 2221048-2226632 Theobroma cacao
Thecc1EG017175 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 2221048-2222047 Theobroma cacao
Thecc1EG017175 1.0kb downstream 1.0kb downstream 5585 true scaffold_4: 2222048-2227632 Theobroma cacao
Thecc1EG017175 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 2226633-2227632 Theobroma cacao
Thecc1EG017175 2.0kb upstream 2.0kb upstream 6585 true scaffold_4: 2220048-2226632 Theobroma cacao
Thecc1EG017175 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 2220048-2222047 Theobroma cacao
Thecc1EG017175 2.0kb downstream 2.0kb downstream 6585 true scaffold_4: 2222048-2228632 Theobroma cacao
Thecc1EG017175 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 2226633-2228632 Theobroma cacao
Thecc1EG017175 5.0kb upstream 5.0kb upstream 9585 true scaffold_4: 2217048-2226632 Theobroma cacao
Thecc1EG017175 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 2217048-2222047 Theobroma cacao
Thecc1EG017175 5.0kb downstream 5.0kb downstream 9585 true scaffold_4: 2222048-2231632 Theobroma cacao
Thecc1EG017175 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 2226633-2231632 Theobroma cacao
Thecc1EG017175 10.0kb upstream 10.0kb upstream 14585 true scaffold_4: 2212048-2226632 Theobroma cacao
Thecc1EG017175 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 2212048-2222047 Theobroma cacao
Thecc1EG017175 10.0kb downstream 10.0kb downstream 14585 true scaffold_4: 2222048-2236632 Theobroma cacao
Thecc1EG017175 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 2226633-2236632 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832680 5264 Brassicales-Malvales View MSA
124337597 5266 SBM View MSA
124241900 5268 Malvidae View MSA
124063737 5270 Rosid View MSA
123738222 5271 Pentapetalae View MSA
122796833 5272 Eudicot View MSA
122044630 5273 Angiosperm View MSA
121346457 5274 Embryophyte View MSA
123428846 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain