Gene : Thecc1EG017122 T. cacao v1.1
Defline:  (1 of 61) PF03140 - Plant protein of unknown function (DUF247) Genomic Order:  305
Name:  ? Thecc1EG017122 Secondary Identifier:  ? PAC:27452129
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG017122 0.5kb upstream 0.5kb upstream 2275 true scaffold_4: 1962173-1964447 Theobroma cacao
Thecc1EG017122 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 1962173-1962672 Theobroma cacao
Thecc1EG017122 0.5kb downstream 0.5kb downstream 2275 true scaffold_4: 1962673-1964947 Theobroma cacao
Thecc1EG017122 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 1964448-1964947 Theobroma cacao
Thecc1EG017122 1.0kb upstream 1.0kb upstream 2775 true scaffold_4: 1961673-1964447 Theobroma cacao
Thecc1EG017122 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 1961673-1962672 Theobroma cacao
Thecc1EG017122 1.0kb downstream 1.0kb downstream 2775 true scaffold_4: 1962673-1965447 Theobroma cacao
Thecc1EG017122 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 1964448-1965447 Theobroma cacao
Thecc1EG017122 2.0kb upstream 2.0kb upstream 3775 true scaffold_4: 1960673-1964447 Theobroma cacao
Thecc1EG017122 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 1960673-1962672 Theobroma cacao
Thecc1EG017122 2.0kb downstream 2.0kb downstream 3775 true scaffold_4: 1962673-1966447 Theobroma cacao
Thecc1EG017122 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 1964448-1966447 Theobroma cacao
Thecc1EG017122 5.0kb upstream 5.0kb upstream 6775 true scaffold_4: 1957673-1964447 Theobroma cacao
Thecc1EG017122 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 1957673-1962672 Theobroma cacao
Thecc1EG017122 5.0kb downstream 5.0kb downstream 6775 true scaffold_4: 1962673-1969447 Theobroma cacao
Thecc1EG017122 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 1964448-1969447 Theobroma cacao
Thecc1EG017122 10.0kb upstream 10.0kb upstream 11775 true scaffold_4: 1952673-1964447 Theobroma cacao
Thecc1EG017122 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 1952673-1962672 Theobroma cacao
Thecc1EG017122 10.0kb downstream 10.0kb downstream 11775 true scaffold_4: 1962673-1974447 Theobroma cacao
Thecc1EG017122 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 1964448-1974447 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826054 5264 Brassicales-Malvales View MSA
124351331 5266 SBM View MSA
124254082 5268 Malvidae View MSA
124074599 5270 Rosid View MSA
123753721 5271 Pentapetalae View MSA
122797892 5272 Eudicot View MSA
122051031 5273 Angiosperm View MSA
121351531 5274 Embryophyte View MSA
123382209 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain