Gene : Thecc1EG017488 T. cacao v1.1
Defline:  (1 of 13) PF02309//PF02362//PF06507 - AUX/IAA family (AUX_IAA) // B3 DNA binding domain (B3) // Auxin response factor (Auxin_resp) Genomic Order:  557
Name:  ? Thecc1EG017488 Secondary Identifier:  ? PAC:27454219
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG017488 0.5kb upstream 0.5kb upstream 24300 true scaffold_4: 4078963-4103262 Theobroma cacao
Thecc1EG017488 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 4078963-4079462 Theobroma cacao
Thecc1EG017488 0.5kb downstream 0.5kb downstream 24300 true scaffold_4: 4079463-4103762 Theobroma cacao
Thecc1EG017488 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 4103263-4103762 Theobroma cacao
Thecc1EG017488 1.0kb upstream 1.0kb upstream 24800 true scaffold_4: 4078463-4103262 Theobroma cacao
Thecc1EG017488 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 4078463-4079462 Theobroma cacao
Thecc1EG017488 1.0kb downstream 1.0kb downstream 24800 true scaffold_4: 4079463-4104262 Theobroma cacao
Thecc1EG017488 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 4103263-4104262 Theobroma cacao
Thecc1EG017488 2.0kb upstream 2.0kb upstream 25800 true scaffold_4: 4077463-4103262 Theobroma cacao
Thecc1EG017488 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 4077463-4079462 Theobroma cacao
Thecc1EG017488 2.0kb downstream 2.0kb downstream 25800 true scaffold_4: 4079463-4105262 Theobroma cacao
Thecc1EG017488 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 4103263-4105262 Theobroma cacao
Thecc1EG017488 5.0kb upstream 5.0kb upstream 28800 true scaffold_4: 4074463-4103262 Theobroma cacao
Thecc1EG017488 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 4074463-4079462 Theobroma cacao
Thecc1EG017488 5.0kb downstream 5.0kb downstream 28800 true scaffold_4: 4079463-4108262 Theobroma cacao
Thecc1EG017488 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 4103263-4108262 Theobroma cacao
Thecc1EG017488 10.0kb upstream 10.0kb upstream 33800 true scaffold_4: 4069463-4103262 Theobroma cacao
Thecc1EG017488 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 4069463-4079462 Theobroma cacao
Thecc1EG017488 10.0kb downstream 10.0kb downstream 33800 true scaffold_4: 4079463-4113262 Theobroma cacao
Thecc1EG017488 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 4103263-4113262 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830610 5264 Brassicales-Malvales View MSA
124344970 5266 SBM View MSA
124236944 5268 Malvidae View MSA
124073389 5270 Rosid View MSA
123749111 5271 Pentapetalae View MSA
122793528 5272 Eudicot View MSA
122048595 5273 Angiosperm View MSA
121351367 5274 Embryophyte View MSA
123382140 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain