Gene : Thecc1EG017432 T. cacao v1.1
Defline:  (1 of 1) PTHR10836//PTHR10836:SF49 - GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE // SUBFAMILY NOT NAMED Genomic Order:  524
Name:  ? Thecc1EG017432 Secondary Identifier:  ? PAC:27453993
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

9 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao ANAEROFRUCAT-PWY Theobroma cacao pathologic  
Tcacao ANAGLYCOLYSIS-PWY Theobroma cacao pathologic  
Tcacao CALVIN-PWY Theobroma cacao pathologic  
Tcacao GLUCONEO-PWY Theobroma cacao pathologic  
Tcacao PHOTOALL-PWY Theobroma cacao pathologic  
Tcacao PWY-1042 Theobroma cacao pathologic  
Tcacao PWY-5464 Theobroma cacao pathologic  
Tcacao PWY66-399 Theobroma cacao pathologic  
Tcacao SUCSYN-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG017432 0.5kb upstream 0.5kb upstream 3715 true scaffold_4: 3691079-3694793 Theobroma cacao
Thecc1EG017432 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 3694294-3694793 Theobroma cacao
Thecc1EG017432 0.5kb downstream 0.5kb downstream 3715 true scaffold_4: 3690579-3694293 Theobroma cacao
Thecc1EG017432 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 3690579-3691078 Theobroma cacao
Thecc1EG017432 1.0kb upstream 1.0kb upstream 4215 true scaffold_4: 3691079-3695293 Theobroma cacao
Thecc1EG017432 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 3694294-3695293 Theobroma cacao
Thecc1EG017432 1.0kb downstream 1.0kb downstream 4215 true scaffold_4: 3690079-3694293 Theobroma cacao
Thecc1EG017432 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 3690079-3691078 Theobroma cacao
Thecc1EG017432 2.0kb upstream 2.0kb upstream 5215 true scaffold_4: 3691079-3696293 Theobroma cacao
Thecc1EG017432 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 3694294-3696293 Theobroma cacao
Thecc1EG017432 2.0kb downstream 2.0kb downstream 5215 true scaffold_4: 3689079-3694293 Theobroma cacao
Thecc1EG017432 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 3689079-3691078 Theobroma cacao
Thecc1EG017432 5.0kb upstream 5.0kb upstream 8215 true scaffold_4: 3691079-3699293 Theobroma cacao
Thecc1EG017432 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 3694294-3699293 Theobroma cacao
Thecc1EG017432 5.0kb downstream 5.0kb downstream 8215 true scaffold_4: 3686079-3694293 Theobroma cacao
Thecc1EG017432 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 3686079-3691078 Theobroma cacao
Thecc1EG017432 10.0kb upstream 10.0kb upstream 13215 true scaffold_4: 3691079-3704293 Theobroma cacao
Thecc1EG017432 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 3694294-3704293 Theobroma cacao
Thecc1EG017432 10.0kb downstream 10.0kb downstream 13215 true scaffold_4: 3681079-3694293 Theobroma cacao
Thecc1EG017432 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 3681079-3691078 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837960 5264 Brassicales-Malvales View MSA
124344179 5266 SBM View MSA
124254162 5268 Malvidae View MSA
124061607 5270 Rosid View MSA
123737488 5271 Pentapetalae View MSA
122795007 5272 Eudicot View MSA
122045489 5273 Angiosperm View MSA
121346351 5274 Embryophyte View MSA
123425156 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain