Gene : Thecc1EG017389 T. cacao v1.1
Defline:  (1 of 1) PTHR23240//PTHR23240:SF6 - DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED // DNA CROSS-LINK REPAIR 1A PROTEIN Genomic Order:  506
Name:  ? Thecc1EG017389 Secondary Identifier:  ? PAC:27451944
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG017389 0.5kb upstream 0.5kb upstream 3838 true scaffold_4: 3396948-3400785 Theobroma cacao
Thecc1EG017389 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 3400286-3400785 Theobroma cacao
Thecc1EG017389 0.5kb downstream 0.5kb downstream 3838 true scaffold_4: 3396448-3400285 Theobroma cacao
Thecc1EG017389 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 3396448-3396947 Theobroma cacao
Thecc1EG017389 1.0kb upstream 1.0kb upstream 4338 true scaffold_4: 3396948-3401285 Theobroma cacao
Thecc1EG017389 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 3400286-3401285 Theobroma cacao
Thecc1EG017389 1.0kb downstream 1.0kb downstream 4338 true scaffold_4: 3395948-3400285 Theobroma cacao
Thecc1EG017389 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 3395948-3396947 Theobroma cacao
Thecc1EG017389 2.0kb upstream 2.0kb upstream 5338 true scaffold_4: 3396948-3402285 Theobroma cacao
Thecc1EG017389 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 3400286-3402285 Theobroma cacao
Thecc1EG017389 2.0kb downstream 2.0kb downstream 5338 true scaffold_4: 3394948-3400285 Theobroma cacao
Thecc1EG017389 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 3394948-3396947 Theobroma cacao
Thecc1EG017389 5.0kb upstream 5.0kb upstream 8338 true scaffold_4: 3396948-3405285 Theobroma cacao
Thecc1EG017389 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 3400286-3405285 Theobroma cacao
Thecc1EG017389 5.0kb downstream 5.0kb downstream 8338 true scaffold_4: 3391948-3400285 Theobroma cacao
Thecc1EG017389 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 3391948-3396947 Theobroma cacao
Thecc1EG017389 10.0kb upstream 10.0kb upstream 13338 true scaffold_4: 3396948-3410285 Theobroma cacao
Thecc1EG017389 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 3400286-3410285 Theobroma cacao
Thecc1EG017389 10.0kb downstream 10.0kb downstream 13338 true scaffold_4: 3386948-3400285 Theobroma cacao
Thecc1EG017389 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 3386948-3396947 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829319 5264 Brassicales-Malvales View MSA
124338461 5266 SBM View MSA
124248628 5268 Malvidae View MSA
124073622 5270 Rosid View MSA
123741645 5271 Pentapetalae View MSA
122793173 5272 Eudicot View MSA
122046861 5273 Angiosperm View MSA
121351448 5274 Embryophyte View MSA
123426430 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain