Gene : Thecc1EG017367 T. cacao v1.1
Defline:  (1 of 6) PF05055 - Protein of unknown function (DUF677) (DUF677) Genomic Order:  489
Name:  ? Thecc1EG017367 Secondary Identifier:  ? PAC:27456227
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG017367 0.5kb upstream 0.5kb upstream 3070 true scaffold_4: 3275651-3278720 Theobroma cacao
Thecc1EG017367 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 3278221-3278720 Theobroma cacao
Thecc1EG017367 0.5kb downstream 0.5kb downstream 3070 true scaffold_4: 3275151-3278220 Theobroma cacao
Thecc1EG017367 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 3275151-3275650 Theobroma cacao
Thecc1EG017367 1.0kb upstream 1.0kb upstream 3570 true scaffold_4: 3275651-3279220 Theobroma cacao
Thecc1EG017367 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 3278221-3279220 Theobroma cacao
Thecc1EG017367 1.0kb downstream 1.0kb downstream 3570 true scaffold_4: 3274651-3278220 Theobroma cacao
Thecc1EG017367 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 3274651-3275650 Theobroma cacao
Thecc1EG017367 2.0kb upstream 2.0kb upstream 4570 true scaffold_4: 3275651-3280220 Theobroma cacao
Thecc1EG017367 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 3278221-3280220 Theobroma cacao
Thecc1EG017367 2.0kb downstream 2.0kb downstream 4570 true scaffold_4: 3273651-3278220 Theobroma cacao
Thecc1EG017367 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 3273651-3275650 Theobroma cacao
Thecc1EG017367 5.0kb upstream 5.0kb upstream 7570 true scaffold_4: 3275651-3283220 Theobroma cacao
Thecc1EG017367 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 3278221-3283220 Theobroma cacao
Thecc1EG017367 5.0kb downstream 5.0kb downstream 7570 true scaffold_4: 3270651-3278220 Theobroma cacao
Thecc1EG017367 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 3270651-3275650 Theobroma cacao
Thecc1EG017367 10.0kb upstream 10.0kb upstream 12570 true scaffold_4: 3275651-3288220 Theobroma cacao
Thecc1EG017367 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 3278221-3288220 Theobroma cacao
Thecc1EG017367 10.0kb downstream 10.0kb downstream 12570 true scaffold_4: 3265651-3278220 Theobroma cacao
Thecc1EG017367 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 3265651-3275650 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838183 5264 Brassicales-Malvales View MSA
124336471 5266 SBM View MSA
124237269 5268 Malvidae View MSA
124061570 5270 Rosid View MSA
123747864 5271 Pentapetalae View MSA
122792718 5272 Eudicot View MSA
122051174 5273 Angiosperm View MSA
121347879 5274 Embryophyte View MSA
123380662 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain