Gene : Thecc1EG017346 T. cacao v1.1
Defline:  (1 of 2) PTHR13445:SF3 - PROTEIN TSSC4 Genomic Order:  473
Name:  ? Thecc1EG017346 Secondary Identifier:  ? PAC:27452513
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG017346 0.5kb upstream 0.5kb upstream 2836 true scaffold_4: 3136573-3139408 Theobroma cacao
Thecc1EG017346 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 3136573-3137072 Theobroma cacao
Thecc1EG017346 0.5kb downstream 0.5kb downstream 2836 true scaffold_4: 3137073-3139908 Theobroma cacao
Thecc1EG017346 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 3139409-3139908 Theobroma cacao
Thecc1EG017346 1.0kb upstream 1.0kb upstream 3336 true scaffold_4: 3136073-3139408 Theobroma cacao
Thecc1EG017346 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 3136073-3137072 Theobroma cacao
Thecc1EG017346 1.0kb downstream 1.0kb downstream 3336 true scaffold_4: 3137073-3140408 Theobroma cacao
Thecc1EG017346 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 3139409-3140408 Theobroma cacao
Thecc1EG017346 2.0kb upstream 2.0kb upstream 4336 true scaffold_4: 3135073-3139408 Theobroma cacao
Thecc1EG017346 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 3135073-3137072 Theobroma cacao
Thecc1EG017346 2.0kb downstream 2.0kb downstream 4336 true scaffold_4: 3137073-3141408 Theobroma cacao
Thecc1EG017346 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 3139409-3141408 Theobroma cacao
Thecc1EG017346 5.0kb upstream 5.0kb upstream 7336 true scaffold_4: 3132073-3139408 Theobroma cacao
Thecc1EG017346 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 3132073-3137072 Theobroma cacao
Thecc1EG017346 5.0kb downstream 5.0kb downstream 7336 true scaffold_4: 3137073-3144408 Theobroma cacao
Thecc1EG017346 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 3139409-3144408 Theobroma cacao
Thecc1EG017346 10.0kb upstream 10.0kb upstream 12336 true scaffold_4: 3127073-3139408 Theobroma cacao
Thecc1EG017346 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 3127073-3137072 Theobroma cacao
Thecc1EG017346 10.0kb downstream 10.0kb downstream 12336 true scaffold_4: 3137073-3149408 Theobroma cacao
Thecc1EG017346 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 3139409-3149408 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041303 5273 Angiosperm View MSA
123834279 5264 Brassicales-Malvales View MSA
124343906 5266 SBM View MSA
124239851 5268 Malvidae View MSA
124068037 5270 Rosid View MSA
123741101 5271 Pentapetalae View MSA
122794619 5272 Eudicot View MSA
121348542 5274 Embryophyte View MSA
123426495 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain