Gene : Thecc1EG017325 T. cacao v1.1
Defline:  (1 of 1) PTHR32258//PTHR32258:SF2 - FAMILY NOT NAMED // KINASE INTERACTING PROTEIN 1-LIKE PROTEIN NET3C Genomic Order:  451
Name:  ? Thecc1EG017325 Secondary Identifier:  ? PAC:27453901
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG017325 0.5kb upstream 0.5kb upstream 2123 true scaffold_4: 3037549-3039671 Theobroma cacao
Thecc1EG017325 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 3037549-3038048 Theobroma cacao
Thecc1EG017325 0.5kb downstream 0.5kb downstream 2123 true scaffold_4: 3038049-3040171 Theobroma cacao
Thecc1EG017325 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 3039672-3040171 Theobroma cacao
Thecc1EG017325 1.0kb upstream 1.0kb upstream 2623 true scaffold_4: 3037049-3039671 Theobroma cacao
Thecc1EG017325 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 3037049-3038048 Theobroma cacao
Thecc1EG017325 1.0kb downstream 1.0kb downstream 2623 true scaffold_4: 3038049-3040671 Theobroma cacao
Thecc1EG017325 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 3039672-3040671 Theobroma cacao
Thecc1EG017325 2.0kb upstream 2.0kb upstream 3623 true scaffold_4: 3036049-3039671 Theobroma cacao
Thecc1EG017325 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 3036049-3038048 Theobroma cacao
Thecc1EG017325 2.0kb downstream 2.0kb downstream 3623 true scaffold_4: 3038049-3041671 Theobroma cacao
Thecc1EG017325 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 3039672-3041671 Theobroma cacao
Thecc1EG017325 5.0kb upstream 5.0kb upstream 6623 true scaffold_4: 3033049-3039671 Theobroma cacao
Thecc1EG017325 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 3033049-3038048 Theobroma cacao
Thecc1EG017325 5.0kb downstream 5.0kb downstream 6623 true scaffold_4: 3038049-3044671 Theobroma cacao
Thecc1EG017325 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 3039672-3044671 Theobroma cacao
Thecc1EG017325 10.0kb upstream 10.0kb upstream 11623 true scaffold_4: 3028049-3039671 Theobroma cacao
Thecc1EG017325 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 3028049-3038048 Theobroma cacao
Thecc1EG017325 10.0kb downstream 10.0kb downstream 11623 true scaffold_4: 3038049-3049671 Theobroma cacao
Thecc1EG017325 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 3039672-3049671 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824813 5264 Brassicales-Malvales View MSA
124348069 5266 SBM View MSA
124254517 5268 Malvidae View MSA
124062637 5270 Rosid View MSA
123744741 5271 Pentapetalae View MSA
122794201 5272 Eudicot View MSA
122048617 5273 Angiosperm View MSA
121311040 5274 Embryophyte View MSA
123348394 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain