Gene : Thecc1EG017306 T. cacao v1.1
Defline:  (1 of 11) PF02893 - GRAM domain (GRAM) Genomic Order:  439
Name:  ? Thecc1EG017306 Secondary Identifier:  ? PAC:27451955
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG017306 0.5kb upstream 0.5kb upstream 2459 true scaffold_4: 2913003-2915461 Theobroma cacao
Thecc1EG017306 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 2914962-2915461 Theobroma cacao
Thecc1EG017306 0.5kb downstream 0.5kb downstream 2459 true scaffold_4: 2912503-2914961 Theobroma cacao
Thecc1EG017306 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 2912503-2913002 Theobroma cacao
Thecc1EG017306 1.0kb upstream 1.0kb upstream 2959 true scaffold_4: 2913003-2915961 Theobroma cacao
Thecc1EG017306 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 2914962-2915961 Theobroma cacao
Thecc1EG017306 1.0kb downstream 1.0kb downstream 2959 true scaffold_4: 2912003-2914961 Theobroma cacao
Thecc1EG017306 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 2912003-2913002 Theobroma cacao
Thecc1EG017306 2.0kb upstream 2.0kb upstream 3959 true scaffold_4: 2913003-2916961 Theobroma cacao
Thecc1EG017306 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 2914962-2916961 Theobroma cacao
Thecc1EG017306 2.0kb downstream 2.0kb downstream 3959 true scaffold_4: 2911003-2914961 Theobroma cacao
Thecc1EG017306 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 2911003-2913002 Theobroma cacao
Thecc1EG017306 5.0kb upstream 5.0kb upstream 6959 true scaffold_4: 2913003-2919961 Theobroma cacao
Thecc1EG017306 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 2914962-2919961 Theobroma cacao
Thecc1EG017306 5.0kb downstream 5.0kb downstream 6959 true scaffold_4: 2908003-2914961 Theobroma cacao
Thecc1EG017306 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 2908003-2913002 Theobroma cacao
Thecc1EG017306 10.0kb upstream 10.0kb upstream 11959 true scaffold_4: 2913003-2924961 Theobroma cacao
Thecc1EG017306 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 2914962-2924961 Theobroma cacao
Thecc1EG017306 10.0kb downstream 10.0kb downstream 11959 true scaffold_4: 2903003-2914961 Theobroma cacao
Thecc1EG017306 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 2903003-2913002 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827077 5264 Brassicales-Malvales View MSA
124349490 5266 SBM View MSA
124248271 5268 Malvidae View MSA
124071100 5270 Rosid View MSA
123744777 5271 Pentapetalae View MSA
122797412 5272 Eudicot View MSA
122050342 5273 Angiosperm View MSA
121350470 5274 Embryophyte View MSA
123381748 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain