Gene : Thecc1EG018356 T. cacao v1.1
Defline:  (1 of 182) PF00646 - F-box domain (F-box) Genomic Order:  785
Name:  ? Thecc1EG018356 Secondary Identifier:  ? PAC:27453318
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG018356 0.5kb upstream 0.5kb upstream 5035 true scaffold_4: 13866503-13871537 Theobroma cacao
Thecc1EG018356 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 13866503-13867002 Theobroma cacao
Thecc1EG018356 0.5kb downstream 0.5kb downstream 5035 true scaffold_4: 13867003-13872037 Theobroma cacao
Thecc1EG018356 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 13871538-13872037 Theobroma cacao
Thecc1EG018356 1.0kb upstream 1.0kb upstream 5535 true scaffold_4: 13866003-13871537 Theobroma cacao
Thecc1EG018356 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 13866003-13867002 Theobroma cacao
Thecc1EG018356 1.0kb downstream 1.0kb downstream 5535 true scaffold_4: 13867003-13872537 Theobroma cacao
Thecc1EG018356 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 13871538-13872537 Theobroma cacao
Thecc1EG018356 2.0kb upstream 2.0kb upstream 6535 true scaffold_4: 13865003-13871537 Theobroma cacao
Thecc1EG018356 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 13865003-13867002 Theobroma cacao
Thecc1EG018356 2.0kb downstream 2.0kb downstream 6535 true scaffold_4: 13867003-13873537 Theobroma cacao
Thecc1EG018356 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 13871538-13873537 Theobroma cacao
Thecc1EG018356 5.0kb upstream 5.0kb upstream 9535 true scaffold_4: 13862003-13871537 Theobroma cacao
Thecc1EG018356 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 13862003-13867002 Theobroma cacao
Thecc1EG018356 5.0kb downstream 5.0kb downstream 9535 true scaffold_4: 13867003-13876537 Theobroma cacao
Thecc1EG018356 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 13871538-13876537 Theobroma cacao
Thecc1EG018356 10.0kb upstream 10.0kb upstream 14535 true scaffold_4: 13857003-13871537 Theobroma cacao
Thecc1EG018356 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 13857003-13867002 Theobroma cacao
Thecc1EG018356 10.0kb downstream 10.0kb downstream 14535 true scaffold_4: 13867003-13881537 Theobroma cacao
Thecc1EG018356 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 13871538-13881537 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826771 5264 Brassicales-Malvales View MSA
124321174 5266 SBM View MSA
124249073 5268 Malvidae View MSA
124038227 5270 Rosid View MSA
123610701 5271 Pentapetalae View MSA
122797964 5272 Eudicot View MSA
122050940 5273 Angiosperm View MSA
121351679 5274 Embryophyte View MSA
123382274 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain