Gene : Thecc1EG018123 T. cacao v1.1
Defline:  (1 of 1) PTHR18895:SF60 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MFJ20 Genomic Order:  717
Name:  ? Thecc1EG018123 Secondary Identifier:  ? PAC:27452674
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG018123 0.5kb upstream 0.5kb upstream 9230 true scaffold_4: 11045089-11054318 Theobroma cacao
Thecc1EG018123 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 11045089-11045588 Theobroma cacao
Thecc1EG018123 0.5kb downstream 0.5kb downstream 9230 true scaffold_4: 11045589-11054818 Theobroma cacao
Thecc1EG018123 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 11054319-11054818 Theobroma cacao
Thecc1EG018123 1.0kb upstream 1.0kb upstream 9730 true scaffold_4: 11044589-11054318 Theobroma cacao
Thecc1EG018123 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 11044589-11045588 Theobroma cacao
Thecc1EG018123 1.0kb downstream 1.0kb downstream 9730 true scaffold_4: 11045589-11055318 Theobroma cacao
Thecc1EG018123 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 11054319-11055318 Theobroma cacao
Thecc1EG018123 2.0kb upstream 2.0kb upstream 10730 true scaffold_4: 11043589-11054318 Theobroma cacao
Thecc1EG018123 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 11043589-11045588 Theobroma cacao
Thecc1EG018123 2.0kb downstream 2.0kb downstream 10730 true scaffold_4: 11045589-11056318 Theobroma cacao
Thecc1EG018123 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 11054319-11056318 Theobroma cacao
Thecc1EG018123 5.0kb upstream 5.0kb upstream 13730 true scaffold_4: 11040589-11054318 Theobroma cacao
Thecc1EG018123 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 11040589-11045588 Theobroma cacao
Thecc1EG018123 5.0kb downstream 5.0kb downstream 13730 true scaffold_4: 11045589-11059318 Theobroma cacao
Thecc1EG018123 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 11054319-11059318 Theobroma cacao
Thecc1EG018123 10.0kb upstream 10.0kb upstream 18730 true scaffold_4: 11035589-11054318 Theobroma cacao
Thecc1EG018123 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 11035589-11045588 Theobroma cacao
Thecc1EG018123 10.0kb downstream 10.0kb downstream 18730 true scaffold_4: 11045589-11064318 Theobroma cacao
Thecc1EG018123 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 11054319-11064318 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124340262 5266 SBM View MSA
123835362 5264 Brassicales-Malvales View MSA
124237906 5268 Malvidae View MSA
124067433 5270 Rosid View MSA
123738350 5271 Pentapetalae View MSA
122790005 5272 Eudicot View MSA
122044279 5273 Angiosperm View MSA
121347600 5274 Embryophyte View MSA
123423855 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain