Gene : Thecc1EG017840 T. cacao v1.1
Defline:  (1 of 1) PTHR10953//PTHR10953:SF135 - UBIQUITIN-ACTIVATING ENZYME E1 // SUBFAMILY NOT NAMED Genomic Order:  652
Name:  ? Thecc1EG017840 Secondary Identifier:  ? PAC:27452806
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6823 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG017840 0.5kb upstream 0.5kb upstream 26503 true scaffold_4: 7854999-7881501 Theobroma cacao
Thecc1EG017840 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 7881002-7881501 Theobroma cacao
Thecc1EG017840 0.5kb downstream 0.5kb downstream 26503 true scaffold_4: 7854499-7881001 Theobroma cacao
Thecc1EG017840 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 7854499-7854998 Theobroma cacao
Thecc1EG017840 1.0kb upstream 1.0kb upstream 27003 true scaffold_4: 7854999-7882001 Theobroma cacao
Thecc1EG017840 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 7881002-7882001 Theobroma cacao
Thecc1EG017840 1.0kb downstream 1.0kb downstream 27003 true scaffold_4: 7853999-7881001 Theobroma cacao
Thecc1EG017840 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 7853999-7854998 Theobroma cacao
Thecc1EG017840 2.0kb upstream 2.0kb upstream 28003 true scaffold_4: 7854999-7883001 Theobroma cacao
Thecc1EG017840 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 7881002-7883001 Theobroma cacao
Thecc1EG017840 2.0kb downstream 2.0kb downstream 28003 true scaffold_4: 7852999-7881001 Theobroma cacao
Thecc1EG017840 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 7852999-7854998 Theobroma cacao
Thecc1EG017840 5.0kb upstream 5.0kb upstream 31003 true scaffold_4: 7854999-7886001 Theobroma cacao
Thecc1EG017840 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 7881002-7886001 Theobroma cacao
Thecc1EG017840 5.0kb downstream 5.0kb downstream 31003 true scaffold_4: 7849999-7881001 Theobroma cacao
Thecc1EG017840 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 7849999-7854998 Theobroma cacao
Thecc1EG017840 10.0kb upstream 10.0kb upstream 36003 true scaffold_4: 7854999-7891001 Theobroma cacao
Thecc1EG017840 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 7881002-7891001 Theobroma cacao
Thecc1EG017840 10.0kb downstream 10.0kb downstream 36003 true scaffold_4: 7844999-7881001 Theobroma cacao
Thecc1EG017840 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 7844999-7854998 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838513 5264 Brassicales-Malvales View MSA
124337795 5266 SBM View MSA
124237506 5268 Malvidae View MSA
124050296 5270 Rosid View MSA
123738814 5271 Pentapetalae View MSA
122786835 5272 Eudicot View MSA
122045558 5273 Angiosperm View MSA
121345835 5274 Embryophyte View MSA
123425189 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain