Gene : Thecc1EG017687 T. cacao v1.1
Defline:  (1 of 1) K08339 - autophagy-related protein 5 (ATG5) Genomic Order:  614
Name:  ? Thecc1EG017687 Secondary Identifier:  ? PAC:27452983
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG017687 0.5kb upstream 0.5kb upstream 16752 true scaffold_4: 6149423-6166174 Theobroma cacao
Thecc1EG017687 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 6149423-6149922 Theobroma cacao
Thecc1EG017687 0.5kb downstream 0.5kb downstream 16752 true scaffold_4: 6149923-6166674 Theobroma cacao
Thecc1EG017687 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 6166175-6166674 Theobroma cacao
Thecc1EG017687 1.0kb upstream 1.0kb upstream 17252 true scaffold_4: 6148923-6166174 Theobroma cacao
Thecc1EG017687 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 6148923-6149922 Theobroma cacao
Thecc1EG017687 1.0kb downstream 1.0kb downstream 17252 true scaffold_4: 6149923-6167174 Theobroma cacao
Thecc1EG017687 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 6166175-6167174 Theobroma cacao
Thecc1EG017687 2.0kb upstream 2.0kb upstream 18252 true scaffold_4: 6147923-6166174 Theobroma cacao
Thecc1EG017687 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 6147923-6149922 Theobroma cacao
Thecc1EG017687 2.0kb downstream 2.0kb downstream 18252 true scaffold_4: 6149923-6168174 Theobroma cacao
Thecc1EG017687 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 6166175-6168174 Theobroma cacao
Thecc1EG017687 5.0kb upstream 5.0kb upstream 21252 true scaffold_4: 6144923-6166174 Theobroma cacao
Thecc1EG017687 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 6144923-6149922 Theobroma cacao
Thecc1EG017687 5.0kb downstream 5.0kb downstream 21252 true scaffold_4: 6149923-6171174 Theobroma cacao
Thecc1EG017687 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 6166175-6171174 Theobroma cacao
Thecc1EG017687 10.0kb upstream 10.0kb upstream 26252 true scaffold_4: 6139923-6166174 Theobroma cacao
Thecc1EG017687 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 6139923-6149922 Theobroma cacao
Thecc1EG017687 10.0kb downstream 10.0kb downstream 26252 true scaffold_4: 6149923-6176174 Theobroma cacao
Thecc1EG017687 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 6166175-6176174 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838673 5264 Brassicales-Malvales View MSA
124346411 5266 SBM View MSA
124243559 5268 Malvidae View MSA
124066677 5270 Rosid View MSA
123746319 5271 Pentapetalae View MSA
122787337 5272 Eudicot View MSA
122043492 5273 Angiosperm View MSA
121349357 5274 Embryophyte View MSA
123424338 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain