Gene : Thecc1EG018701 T. cacao v1.1
Defline:  (1 of 45) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  954
Name:  ? Thecc1EG018701 Secondary Identifier:  ? PAC:27455344
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG018701 0.5kb upstream 0.5kb upstream 4497 true scaffold_4: 17363492-17367988 Theobroma cacao
Thecc1EG018701 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 17363492-17363991 Theobroma cacao
Thecc1EG018701 0.5kb downstream 0.5kb downstream 4497 true scaffold_4: 17363992-17368488 Theobroma cacao
Thecc1EG018701 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 17367989-17368488 Theobroma cacao
Thecc1EG018701 1.0kb upstream 1.0kb upstream 4997 true scaffold_4: 17362992-17367988 Theobroma cacao
Thecc1EG018701 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 17362992-17363991 Theobroma cacao
Thecc1EG018701 1.0kb downstream 1.0kb downstream 4997 true scaffold_4: 17363992-17368988 Theobroma cacao
Thecc1EG018701 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 17367989-17368988 Theobroma cacao
Thecc1EG018701 2.0kb upstream 2.0kb upstream 5997 true scaffold_4: 17361992-17367988 Theobroma cacao
Thecc1EG018701 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 17361992-17363991 Theobroma cacao
Thecc1EG018701 2.0kb downstream 2.0kb downstream 5997 true scaffold_4: 17363992-17369988 Theobroma cacao
Thecc1EG018701 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 17367989-17369988 Theobroma cacao
Thecc1EG018701 5.0kb upstream 5.0kb upstream 8997 true scaffold_4: 17358992-17367988 Theobroma cacao
Thecc1EG018701 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 17358992-17363991 Theobroma cacao
Thecc1EG018701 5.0kb downstream 5.0kb downstream 8997 true scaffold_4: 17363992-17372988 Theobroma cacao
Thecc1EG018701 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 17367989-17372988 Theobroma cacao
Thecc1EG018701 10.0kb upstream 10.0kb upstream 13997 true scaffold_4: 17353992-17367988 Theobroma cacao
Thecc1EG018701 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 17353992-17363991 Theobroma cacao
Thecc1EG018701 10.0kb downstream 10.0kb downstream 13997 true scaffold_4: 17363992-17377988 Theobroma cacao
Thecc1EG018701 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 17367989-17377988 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833347 5264 Brassicales-Malvales View MSA
124338813 5266 SBM View MSA
124237410 5268 Malvidae View MSA
124068109 5270 Rosid View MSA
123738299 5271 Pentapetalae View MSA
122788769 5272 Eudicot View MSA
122047238 5273 Angiosperm View MSA
121310712 5274 Embryophyte View MSA
123348130 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain