Gene : Thecc1EG018650 T. cacao v1.1
Defline:  (1 of 2) PTHR22811//PTHR22811:SF47 - TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN // EMP24/GP25L/P24 FAMILY/GOLD DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  909
Name:  ? Thecc1EG018650 Secondary Identifier:  ? PAC:27453370
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG018650 0.5kb upstream 0.5kb upstream 3405 true scaffold_4: 17016977-17020381 Theobroma cacao
Thecc1EG018650 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 17016977-17017476 Theobroma cacao
Thecc1EG018650 0.5kb downstream 0.5kb downstream 3405 true scaffold_4: 17017477-17020881 Theobroma cacao
Thecc1EG018650 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 17020382-17020881 Theobroma cacao
Thecc1EG018650 1.0kb upstream 1.0kb upstream 3905 true scaffold_4: 17016477-17020381 Theobroma cacao
Thecc1EG018650 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 17016477-17017476 Theobroma cacao
Thecc1EG018650 1.0kb downstream 1.0kb downstream 3905 true scaffold_4: 17017477-17021381 Theobroma cacao
Thecc1EG018650 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 17020382-17021381 Theobroma cacao
Thecc1EG018650 2.0kb upstream 2.0kb upstream 4905 true scaffold_4: 17015477-17020381 Theobroma cacao
Thecc1EG018650 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 17015477-17017476 Theobroma cacao
Thecc1EG018650 2.0kb downstream 2.0kb downstream 4905 true scaffold_4: 17017477-17022381 Theobroma cacao
Thecc1EG018650 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 17020382-17022381 Theobroma cacao
Thecc1EG018650 5.0kb upstream 5.0kb upstream 7905 true scaffold_4: 17012477-17020381 Theobroma cacao
Thecc1EG018650 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 17012477-17017476 Theobroma cacao
Thecc1EG018650 5.0kb downstream 5.0kb downstream 7905 true scaffold_4: 17017477-17025381 Theobroma cacao
Thecc1EG018650 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 17020382-17025381 Theobroma cacao
Thecc1EG018650 10.0kb upstream 10.0kb upstream 12905 true scaffold_4: 17007477-17020381 Theobroma cacao
Thecc1EG018650 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 17007477-17017476 Theobroma cacao
Thecc1EG018650 10.0kb downstream 10.0kb downstream 12905 true scaffold_4: 17017477-17030381 Theobroma cacao
Thecc1EG018650 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 17020382-17030381 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824796 5264 Brassicales-Malvales View MSA
124349548 5266 SBM View MSA
124253554 5268 Malvidae View MSA
124070301 5270 Rosid View MSA
123742196 5271 Pentapetalae View MSA
122791106 5272 Eudicot View MSA
122049810 5273 Angiosperm View MSA
121349336 5274 Embryophyte View MSA
123428181 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain