Gene : Thecc1EG018609 T. cacao v1.1
Defline:  (1 of 1) PTHR10288//PTHR10288:SF151 - KH DOMAIN CONTAINING RNA BINDING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  892
Name:  ? Thecc1EG018609 Secondary Identifier:  ? PAC:27455585
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG018609 0.5kb upstream 0.5kb upstream 6113 true scaffold_4: 16628766-16634878 Theobroma cacao
Thecc1EG018609 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 16628766-16629265 Theobroma cacao
Thecc1EG018609 0.5kb downstream 0.5kb downstream 6113 true scaffold_4: 16629266-16635378 Theobroma cacao
Thecc1EG018609 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 16634879-16635378 Theobroma cacao
Thecc1EG018609 1.0kb upstream 1.0kb upstream 6613 true scaffold_4: 16628266-16634878 Theobroma cacao
Thecc1EG018609 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 16628266-16629265 Theobroma cacao
Thecc1EG018609 1.0kb downstream 1.0kb downstream 6613 true scaffold_4: 16629266-16635878 Theobroma cacao
Thecc1EG018609 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 16634879-16635878 Theobroma cacao
Thecc1EG018609 2.0kb upstream 2.0kb upstream 7613 true scaffold_4: 16627266-16634878 Theobroma cacao
Thecc1EG018609 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 16627266-16629265 Theobroma cacao
Thecc1EG018609 2.0kb downstream 2.0kb downstream 7613 true scaffold_4: 16629266-16636878 Theobroma cacao
Thecc1EG018609 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 16634879-16636878 Theobroma cacao
Thecc1EG018609 5.0kb upstream 5.0kb upstream 10613 true scaffold_4: 16624266-16634878 Theobroma cacao
Thecc1EG018609 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 16624266-16629265 Theobroma cacao
Thecc1EG018609 5.0kb downstream 5.0kb downstream 10613 true scaffold_4: 16629266-16639878 Theobroma cacao
Thecc1EG018609 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 16634879-16639878 Theobroma cacao
Thecc1EG018609 10.0kb upstream 10.0kb upstream 15613 true scaffold_4: 16619266-16634878 Theobroma cacao
Thecc1EG018609 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 16619266-16629265 Theobroma cacao
Thecc1EG018609 10.0kb downstream 10.0kb downstream 15613 true scaffold_4: 16629266-16644878 Theobroma cacao
Thecc1EG018609 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 16634879-16644878 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041100 5273 Angiosperm View MSA
123833589 5264 Brassicales-Malvales View MSA
124337208 5266 SBM View MSA
124247819 5268 Malvidae View MSA
124071979 5270 Rosid View MSA
123753315 5271 Pentapetalae View MSA
122789321 5272 Eudicot View MSA
121348372 5274 Embryophyte View MSA
123428845 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain