Gene : Thecc1EG018404 T. cacao v1.1
Defline:  (1 of 2) PTHR31384//PTHR31384:SF8 - FAMILY NOT NAMED // AUXIN RESPONSE FACTOR 2 Genomic Order:  807
Name:  ? Thecc1EG018404 Secondary Identifier:  ? PAC:27453031
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG018404 0.5kb upstream 0.5kb upstream 13950 true scaffold_4: 14443799-14457748 Theobroma cacao
Thecc1EG018404 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 14457249-14457748 Theobroma cacao
Thecc1EG018404 0.5kb downstream 0.5kb downstream 13950 true scaffold_4: 14443299-14457248 Theobroma cacao
Thecc1EG018404 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 14443299-14443798 Theobroma cacao
Thecc1EG018404 1.0kb upstream 1.0kb upstream 14450 true scaffold_4: 14443799-14458248 Theobroma cacao
Thecc1EG018404 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 14457249-14458248 Theobroma cacao
Thecc1EG018404 1.0kb downstream 1.0kb downstream 14450 true scaffold_4: 14442799-14457248 Theobroma cacao
Thecc1EG018404 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 14442799-14443798 Theobroma cacao
Thecc1EG018404 2.0kb upstream 2.0kb upstream 15450 true scaffold_4: 14443799-14459248 Theobroma cacao
Thecc1EG018404 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 14457249-14459248 Theobroma cacao
Thecc1EG018404 2.0kb downstream 2.0kb downstream 15450 true scaffold_4: 14441799-14457248 Theobroma cacao
Thecc1EG018404 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 14441799-14443798 Theobroma cacao
Thecc1EG018404 5.0kb upstream 5.0kb upstream 18450 true scaffold_4: 14443799-14462248 Theobroma cacao
Thecc1EG018404 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 14457249-14462248 Theobroma cacao
Thecc1EG018404 5.0kb downstream 5.0kb downstream 18450 true scaffold_4: 14438799-14457248 Theobroma cacao
Thecc1EG018404 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 14438799-14443798 Theobroma cacao
Thecc1EG018404 10.0kb upstream 10.0kb upstream 23450 true scaffold_4: 14443799-14467248 Theobroma cacao
Thecc1EG018404 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 14457249-14467248 Theobroma cacao
Thecc1EG018404 10.0kb downstream 10.0kb downstream 23450 true scaffold_4: 14433799-14457248 Theobroma cacao
Thecc1EG018404 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 14433799-14443798 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123819141 5264 Brassicales-Malvales Singleton cluster - no MSA
124315416 5266 SBM Singleton cluster - no MSA
124248702 5268 Malvidae View MSA
124071222 5270 Rosid View MSA
123753340 5271 Pentapetalae View MSA
122797865 5272 Eudicot View MSA
122051660 5273 Angiosperm View MSA
121351445 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain