Gene : Thecc1EG018390 T. cacao v1.1

Defline:  (1 of 1) K02146 - V-type H+-transporting ATPase subunit d (ATPeV0D, ATP6D) Genomic Order:  800
Name:  ? Thecc1EG018390 Secondary Identifier:  ? PAC:27451887

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG018390 0.5kb upstream 0.5kb upstream 3678 true scaffold_4: 14258862-14262539 Theobroma cacao
Thecc1EG018390 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 14258862-14259361 Theobroma cacao
Thecc1EG018390 0.5kb downstream 0.5kb downstream 3678 true scaffold_4: 14259362-14263039 Theobroma cacao
Thecc1EG018390 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 14262540-14263039 Theobroma cacao
Thecc1EG018390 1.0kb upstream 1.0kb upstream 4178 true scaffold_4: 14258362-14262539 Theobroma cacao
Thecc1EG018390 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 14258362-14259361 Theobroma cacao
Thecc1EG018390 1.0kb downstream 1.0kb downstream 4178 true scaffold_4: 14259362-14263539 Theobroma cacao
Thecc1EG018390 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 14262540-14263539 Theobroma cacao
Thecc1EG018390 2.0kb upstream 2.0kb upstream 5178 true scaffold_4: 14257362-14262539 Theobroma cacao
Thecc1EG018390 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 14257362-14259361 Theobroma cacao
Thecc1EG018390 2.0kb downstream 2.0kb downstream 5178 true scaffold_4: 14259362-14264539 Theobroma cacao
Thecc1EG018390 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 14262540-14264539 Theobroma cacao
Thecc1EG018390 5.0kb upstream 5.0kb upstream 8178 true scaffold_4: 14254362-14262539 Theobroma cacao
Thecc1EG018390 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 14254362-14259361 Theobroma cacao
Thecc1EG018390 5.0kb downstream 5.0kb downstream 8178 true scaffold_4: 14259362-14267539 Theobroma cacao
Thecc1EG018390 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 14262540-14267539 Theobroma cacao
Thecc1EG018390 10.0kb upstream 10.0kb upstream 13178 true scaffold_4: 14249362-14262539 Theobroma cacao
Thecc1EG018390 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 14249362-14259361 Theobroma cacao
Thecc1EG018390 10.0kb downstream 10.0kb downstream 13178 true scaffold_4: 14259362-14272539 Theobroma cacao
Thecc1EG018390 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 14262540-14272539 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836842 5264 Brassicales-Malvales View MSA
124345235 5266 SBM View MSA
124242151 5268 Malvidae View MSA
124065072 5270 Rosid View MSA
123742149 5271 Pentapetalae View MSA
122786040 5272 Eudicot View MSA
122045239 5273 Angiosperm View MSA
121345158 5274 Embryophyte View MSA
123427776 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain