Gene : Thecc1EG019025 T. cacao v1.1
Defline:  (1 of 2) PTHR22835//PTHR22835:SF195 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1132
Name:  ? Thecc1EG019025 Secondary Identifier:  ? PAC:27455020
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao LIPAS-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG019025 0.5kb upstream 0.5kb upstream 5857 true scaffold_4: 19701217-19707073 Theobroma cacao
Thecc1EG019025 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 19701217-19701716 Theobroma cacao
Thecc1EG019025 0.5kb downstream 0.5kb downstream 5857 true scaffold_4: 19701717-19707573 Theobroma cacao
Thecc1EG019025 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 19707074-19707573 Theobroma cacao
Thecc1EG019025 1.0kb upstream 1.0kb upstream 6357 true scaffold_4: 19700717-19707073 Theobroma cacao
Thecc1EG019025 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 19700717-19701716 Theobroma cacao
Thecc1EG019025 1.0kb downstream 1.0kb downstream 6357 true scaffold_4: 19701717-19708073 Theobroma cacao
Thecc1EG019025 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 19707074-19708073 Theobroma cacao
Thecc1EG019025 2.0kb upstream 2.0kb upstream 7357 true scaffold_4: 19699717-19707073 Theobroma cacao
Thecc1EG019025 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 19699717-19701716 Theobroma cacao
Thecc1EG019025 2.0kb downstream 2.0kb downstream 7357 true scaffold_4: 19701717-19709073 Theobroma cacao
Thecc1EG019025 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 19707074-19709073 Theobroma cacao
Thecc1EG019025 5.0kb upstream 5.0kb upstream 10357 true scaffold_4: 19696717-19707073 Theobroma cacao
Thecc1EG019025 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 19696717-19701716 Theobroma cacao
Thecc1EG019025 5.0kb downstream 5.0kb downstream 10357 true scaffold_4: 19701717-19712073 Theobroma cacao
Thecc1EG019025 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 19707074-19712073 Theobroma cacao
Thecc1EG019025 10.0kb upstream 10.0kb upstream 15357 true scaffold_4: 19691717-19707073 Theobroma cacao
Thecc1EG019025 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 19691717-19701716 Theobroma cacao
Thecc1EG019025 10.0kb downstream 10.0kb downstream 15357 true scaffold_4: 19701717-19717073 Theobroma cacao
Thecc1EG019025 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 19707074-19717073 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824569 5264 Brassicales-Malvales View MSA
124351152 5266 SBM View MSA
124249386 5268 Malvidae View MSA
124074404 5270 Rosid View MSA
123753785 5271 Pentapetalae View MSA
122797352 5272 Eudicot View MSA
122051674 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain