Gene : Thecc1EG019022 T. cacao v1.1
Defline:  (1 of 4) PTHR22835//PTHR22835:SF116 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1129
Name:  ? Thecc1EG019022 Secondary Identifier:  ? PAC:27452375
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao LIPAS-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG019022 0.5kb upstream 0.5kb upstream 4344 true scaffold_4: 19672549-19676892 Theobroma cacao
Thecc1EG019022 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 19676393-19676892 Theobroma cacao
Thecc1EG019022 0.5kb downstream 0.5kb downstream 4344 true scaffold_4: 19672049-19676392 Theobroma cacao
Thecc1EG019022 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 19672049-19672548 Theobroma cacao
Thecc1EG019022 1.0kb upstream 1.0kb upstream 4844 true scaffold_4: 19672549-19677392 Theobroma cacao
Thecc1EG019022 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 19676393-19677392 Theobroma cacao
Thecc1EG019022 1.0kb downstream 1.0kb downstream 4844 true scaffold_4: 19671549-19676392 Theobroma cacao
Thecc1EG019022 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 19671549-19672548 Theobroma cacao
Thecc1EG019022 2.0kb upstream 2.0kb upstream 5844 true scaffold_4: 19672549-19678392 Theobroma cacao
Thecc1EG019022 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 19676393-19678392 Theobroma cacao
Thecc1EG019022 2.0kb downstream 2.0kb downstream 5844 true scaffold_4: 19670549-19676392 Theobroma cacao
Thecc1EG019022 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 19670549-19672548 Theobroma cacao
Thecc1EG019022 5.0kb upstream 5.0kb upstream 8844 true scaffold_4: 19672549-19681392 Theobroma cacao
Thecc1EG019022 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 19676393-19681392 Theobroma cacao
Thecc1EG019022 5.0kb downstream 5.0kb downstream 8844 true scaffold_4: 19667549-19676392 Theobroma cacao
Thecc1EG019022 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 19667549-19672548 Theobroma cacao
Thecc1EG019022 10.0kb upstream 10.0kb upstream 13844 true scaffold_4: 19672549-19686392 Theobroma cacao
Thecc1EG019022 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 19676393-19686392 Theobroma cacao
Thecc1EG019022 10.0kb downstream 10.0kb downstream 13844 true scaffold_4: 19662549-19676392 Theobroma cacao
Thecc1EG019022 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 19662549-19672548 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123819014 5264 Brassicales-Malvales Singleton cluster - no MSA
124351753 5266 SBM View MSA
124252926 5268 Malvidae View MSA
124074404 5270 Rosid View MSA
123753785 5271 Pentapetalae View MSA
122797352 5272 Eudicot View MSA
122051674 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain