Gene : Thecc1EG019038 T. cacao v1.1
Defline:  (1 of 4) PTHR11017//PTHR11017:SF162 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1140
Name:  ? Thecc1EG019038 Secondary Identifier:  ? PAC:27452022
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG019038 0.5kb upstream 0.5kb upstream 23602 true scaffold_4: 19790858-19814459 Theobroma cacao
Thecc1EG019038 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 19813960-19814459 Theobroma cacao
Thecc1EG019038 0.5kb downstream 0.5kb downstream 23602 true scaffold_4: 19790358-19813959 Theobroma cacao
Thecc1EG019038 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 19790358-19790857 Theobroma cacao
Thecc1EG019038 1.0kb upstream 1.0kb upstream 24102 true scaffold_4: 19790858-19814959 Theobroma cacao
Thecc1EG019038 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 19813960-19814959 Theobroma cacao
Thecc1EG019038 1.0kb downstream 1.0kb downstream 24102 true scaffold_4: 19789858-19813959 Theobroma cacao
Thecc1EG019038 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 19789858-19790857 Theobroma cacao
Thecc1EG019038 2.0kb upstream 2.0kb upstream 25102 true scaffold_4: 19790858-19815959 Theobroma cacao
Thecc1EG019038 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 19813960-19815959 Theobroma cacao
Thecc1EG019038 2.0kb downstream 2.0kb downstream 25102 true scaffold_4: 19788858-19813959 Theobroma cacao
Thecc1EG019038 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 19788858-19790857 Theobroma cacao
Thecc1EG019038 5.0kb upstream 5.0kb upstream 28102 true scaffold_4: 19790858-19818959 Theobroma cacao
Thecc1EG019038 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 19813960-19818959 Theobroma cacao
Thecc1EG019038 5.0kb downstream 5.0kb downstream 28102 true scaffold_4: 19785858-19813959 Theobroma cacao
Thecc1EG019038 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 19785858-19790857 Theobroma cacao
Thecc1EG019038 10.0kb upstream 10.0kb upstream 33102 true scaffold_4: 19790858-19823959 Theobroma cacao
Thecc1EG019038 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 19813960-19823959 Theobroma cacao
Thecc1EG019038 10.0kb downstream 10.0kb downstream 33102 true scaffold_4: 19780858-19813959 Theobroma cacao
Thecc1EG019038 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 19780858-19790857 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841725 5264 Brassicales-Malvales View MSA
124351817 5266 SBM View MSA
124254498 5268 Malvidae View MSA
124074947 5270 Rosid View MSA
123753572 5271 Pentapetalae View MSA
122797897 5272 Eudicot View MSA
122051706 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain