Gene : Thecc1EG018981 T. cacao v1.1
Defline:  (1 of 1) PTHR11945//PTHR11945:SF155//PTHR11945:SF218 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL8-RELATED // MADS-BOX PROTEIN AGL79 Genomic Order:  1103
Name:  ? Thecc1EG018981 Secondary Identifier:  ? PAC:27453025
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG018981 0.5kb upstream 0.5kb upstream 12902 true scaffold_4: 19362688-19375589 Theobroma cacao
Thecc1EG018981 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 19362688-19363187 Theobroma cacao
Thecc1EG018981 0.5kb downstream 0.5kb downstream 12902 true scaffold_4: 19363188-19376089 Theobroma cacao
Thecc1EG018981 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 19375590-19376089 Theobroma cacao
Thecc1EG018981 1.0kb upstream 1.0kb upstream 13402 true scaffold_4: 19362188-19375589 Theobroma cacao
Thecc1EG018981 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 19362188-19363187 Theobroma cacao
Thecc1EG018981 1.0kb downstream 1.0kb downstream 13402 true scaffold_4: 19363188-19376589 Theobroma cacao
Thecc1EG018981 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 19375590-19376589 Theobroma cacao
Thecc1EG018981 2.0kb upstream 2.0kb upstream 14402 true scaffold_4: 19361188-19375589 Theobroma cacao
Thecc1EG018981 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 19361188-19363187 Theobroma cacao
Thecc1EG018981 2.0kb downstream 2.0kb downstream 14402 true scaffold_4: 19363188-19377589 Theobroma cacao
Thecc1EG018981 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 19375590-19377589 Theobroma cacao
Thecc1EG018981 5.0kb upstream 5.0kb upstream 17402 true scaffold_4: 19358188-19375589 Theobroma cacao
Thecc1EG018981 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 19358188-19363187 Theobroma cacao
Thecc1EG018981 5.0kb downstream 5.0kb downstream 17402 true scaffold_4: 19363188-19380589 Theobroma cacao
Thecc1EG018981 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 19375590-19380589 Theobroma cacao
Thecc1EG018981 10.0kb upstream 10.0kb upstream 22402 true scaffold_4: 19353188-19375589 Theobroma cacao
Thecc1EG018981 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 19353188-19363187 Theobroma cacao
Thecc1EG018981 10.0kb downstream 10.0kb downstream 22402 true scaffold_4: 19363188-19385589 Theobroma cacao
Thecc1EG018981 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 19375590-19385589 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041064 5273 Angiosperm View MSA
123826476 5264 Brassicales-Malvales View MSA
124348163 5266 SBM View MSA
124246685 5268 Malvidae View MSA
124072328 5270 Rosid View MSA
123751710 5271 Pentapetalae View MSA
122788972 5272 Eudicot View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain