Gene : Thecc1EG018957 T. cacao v1.1
Defline:  (1 of 7) PTHR33470//PTHR33470:SF1 - FAMILY NOT NAMED // POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN Genomic Order:  1087
Name:  ? Thecc1EG018957 Secondary Identifier:  ? PAC:27454214
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG018957 0.5kb upstream 0.5kb upstream 2294 true scaffold_4: 19208481-19210774 Theobroma cacao
Thecc1EG018957 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 19208481-19208980 Theobroma cacao
Thecc1EG018957 0.5kb downstream 0.5kb downstream 2294 true scaffold_4: 19208981-19211274 Theobroma cacao
Thecc1EG018957 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 19210775-19211274 Theobroma cacao
Thecc1EG018957 1.0kb upstream 1.0kb upstream 2794 true scaffold_4: 19207981-19210774 Theobroma cacao
Thecc1EG018957 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 19207981-19208980 Theobroma cacao
Thecc1EG018957 1.0kb downstream 1.0kb downstream 2794 true scaffold_4: 19208981-19211774 Theobroma cacao
Thecc1EG018957 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 19210775-19211774 Theobroma cacao
Thecc1EG018957 2.0kb upstream 2.0kb upstream 3794 true scaffold_4: 19206981-19210774 Theobroma cacao
Thecc1EG018957 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 19206981-19208980 Theobroma cacao
Thecc1EG018957 2.0kb downstream 2.0kb downstream 3794 true scaffold_4: 19208981-19212774 Theobroma cacao
Thecc1EG018957 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 19210775-19212774 Theobroma cacao
Thecc1EG018957 5.0kb upstream 5.0kb upstream 6794 true scaffold_4: 19203981-19210774 Theobroma cacao
Thecc1EG018957 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 19203981-19208980 Theobroma cacao
Thecc1EG018957 5.0kb downstream 5.0kb downstream 6794 true scaffold_4: 19208981-19215774 Theobroma cacao
Thecc1EG018957 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 19210775-19215774 Theobroma cacao
Thecc1EG018957 10.0kb upstream 10.0kb upstream 11794 true scaffold_4: 19198981-19210774 Theobroma cacao
Thecc1EG018957 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 19198981-19208980 Theobroma cacao
Thecc1EG018957 10.0kb downstream 10.0kb downstream 11794 true scaffold_4: 19208981-19220774 Theobroma cacao
Thecc1EG018957 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 19210775-19220774 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840198 5264 Brassicales-Malvales View MSA
124350149 5266 SBM View MSA
124237056 5268 Malvidae View MSA
124065912 5270 Rosid View MSA
123753028 5271 Pentapetalae View MSA
122796591 5272 Eudicot View MSA
122051631 5273 Angiosperm View MSA
121349317 5274 Embryophyte View MSA
123381274 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain