Gene : Thecc1EG018968 T. cacao v1.1
Defline:  (1 of 4) PTHR10366//PTHR10366:SF332 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // SUBFAMILY NOT NAMED Genomic Order:  1093
Name:  ? Thecc1EG018968 Secondary Identifier:  ? PAC:27452143
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-361 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG018968 0.5kb upstream 0.5kb upstream 43803 true scaffold_4: 19274292-19318094 Theobroma cacao
Thecc1EG018968 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 19274292-19274791 Theobroma cacao
Thecc1EG018968 0.5kb downstream 0.5kb downstream 43803 true scaffold_4: 19274792-19318594 Theobroma cacao
Thecc1EG018968 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 19318095-19318594 Theobroma cacao
Thecc1EG018968 1.0kb upstream 1.0kb upstream 44303 true scaffold_4: 19273792-19318094 Theobroma cacao
Thecc1EG018968 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 19273792-19274791 Theobroma cacao
Thecc1EG018968 1.0kb downstream 1.0kb downstream 44303 true scaffold_4: 19274792-19319094 Theobroma cacao
Thecc1EG018968 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 19318095-19319094 Theobroma cacao
Thecc1EG018968 2.0kb upstream 2.0kb upstream 45303 true scaffold_4: 19272792-19318094 Theobroma cacao
Thecc1EG018968 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 19272792-19274791 Theobroma cacao
Thecc1EG018968 2.0kb downstream 2.0kb downstream 45303 true scaffold_4: 19274792-19320094 Theobroma cacao
Thecc1EG018968 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 19318095-19320094 Theobroma cacao
Thecc1EG018968 5.0kb upstream 5.0kb upstream 48303 true scaffold_4: 19269792-19318094 Theobroma cacao
Thecc1EG018968 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 19269792-19274791 Theobroma cacao
Thecc1EG018968 5.0kb downstream 5.0kb downstream 48303 true scaffold_4: 19274792-19323094 Theobroma cacao
Thecc1EG018968 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 19318095-19323094 Theobroma cacao
Thecc1EG018968 10.0kb upstream 10.0kb upstream 53303 true scaffold_4: 19264792-19318094 Theobroma cacao
Thecc1EG018968 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 19264792-19274791 Theobroma cacao
Thecc1EG018968 10.0kb downstream 10.0kb downstream 53303 true scaffold_4: 19274792-19328094 Theobroma cacao
Thecc1EG018968 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 19318095-19328094 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841739 5264 Brassicales-Malvales View MSA
124322998 5266 SBM View MSA
124169285 5268 Malvidae View MSA
124041060 5270 Rosid View MSA
123749871 5271 Pentapetalae View MSA
122798457 5272 Eudicot View MSA
122050735 5273 Angiosperm View MSA
121350507 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain