Gene : Thecc1EG018937 T. cacao v1.1
Defline:  (1 of 15) PTHR23155:SF402 - DISEASE RESISTANCE PROTEIN RPP13-RELATED Genomic Order:  1073
Name:  ? Thecc1EG018937 Secondary Identifier:  ? PAC:27452846
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG018937 0.5kb upstream 0.5kb upstream 6387 true scaffold_4: 19106317-19112703 Theobroma cacao
Thecc1EG018937 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 19106317-19106816 Theobroma cacao
Thecc1EG018937 0.5kb downstream 0.5kb downstream 6387 true scaffold_4: 19106817-19113203 Theobroma cacao
Thecc1EG018937 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 19112704-19113203 Theobroma cacao
Thecc1EG018937 1.0kb upstream 1.0kb upstream 6887 true scaffold_4: 19105817-19112703 Theobroma cacao
Thecc1EG018937 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 19105817-19106816 Theobroma cacao
Thecc1EG018937 1.0kb downstream 1.0kb downstream 6887 true scaffold_4: 19106817-19113703 Theobroma cacao
Thecc1EG018937 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 19112704-19113703 Theobroma cacao
Thecc1EG018937 2.0kb upstream 2.0kb upstream 7887 true scaffold_4: 19104817-19112703 Theobroma cacao
Thecc1EG018937 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 19104817-19106816 Theobroma cacao
Thecc1EG018937 2.0kb downstream 2.0kb downstream 7887 true scaffold_4: 19106817-19114703 Theobroma cacao
Thecc1EG018937 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 19112704-19114703 Theobroma cacao
Thecc1EG018937 5.0kb upstream 5.0kb upstream 10887 true scaffold_4: 19101817-19112703 Theobroma cacao
Thecc1EG018937 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 19101817-19106816 Theobroma cacao
Thecc1EG018937 5.0kb downstream 5.0kb downstream 10887 true scaffold_4: 19106817-19117703 Theobroma cacao
Thecc1EG018937 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 19112704-19117703 Theobroma cacao
Thecc1EG018937 10.0kb upstream 10.0kb upstream 15887 true scaffold_4: 19096817-19112703 Theobroma cacao
Thecc1EG018937 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 19096817-19106816 Theobroma cacao
Thecc1EG018937 10.0kb downstream 10.0kb downstream 15887 true scaffold_4: 19106817-19122703 Theobroma cacao
Thecc1EG018937 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 19112704-19122703 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839056 5264 Brassicales-Malvales View MSA
124350995 5266 SBM View MSA
124253634 5268 Malvidae View MSA
124074947 5270 Rosid View MSA
123753572 5271 Pentapetalae View MSA
122797897 5272 Eudicot View MSA
122051706 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain