Gene : Thecc1EG018774 T. cacao v1.1
Defline:  (1 of 1) PTHR31413//PTHR31413:SF0 - FAMILY NOT NAMED // NINJA-FAMILY PROTEIN AFP3 Genomic Order:  1008
Name:  ? Thecc1EG018774 Secondary Identifier:  ? PAC:27452924
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG018774 0.5kb upstream 0.5kb upstream 4047 true scaffold_4: 17807744-17811790 Theobroma cacao
Thecc1EG018774 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 17811291-17811790 Theobroma cacao
Thecc1EG018774 0.5kb downstream 0.5kb downstream 4047 true scaffold_4: 17807244-17811290 Theobroma cacao
Thecc1EG018774 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 17807244-17807743 Theobroma cacao
Thecc1EG018774 1.0kb upstream 1.0kb upstream 4547 true scaffold_4: 17807744-17812290 Theobroma cacao
Thecc1EG018774 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 17811291-17812290 Theobroma cacao
Thecc1EG018774 1.0kb downstream 1.0kb downstream 4547 true scaffold_4: 17806744-17811290 Theobroma cacao
Thecc1EG018774 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 17806744-17807743 Theobroma cacao
Thecc1EG018774 2.0kb upstream 2.0kb upstream 5547 true scaffold_4: 17807744-17813290 Theobroma cacao
Thecc1EG018774 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 17811291-17813290 Theobroma cacao
Thecc1EG018774 2.0kb downstream 2.0kb downstream 5547 true scaffold_4: 17805744-17811290 Theobroma cacao
Thecc1EG018774 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 17805744-17807743 Theobroma cacao
Thecc1EG018774 5.0kb upstream 5.0kb upstream 8547 true scaffold_4: 17807744-17816290 Theobroma cacao
Thecc1EG018774 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 17811291-17816290 Theobroma cacao
Thecc1EG018774 5.0kb downstream 5.0kb downstream 8547 true scaffold_4: 17802744-17811290 Theobroma cacao
Thecc1EG018774 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 17802744-17807743 Theobroma cacao
Thecc1EG018774 10.0kb upstream 10.0kb upstream 13547 true scaffold_4: 17807744-17821290 Theobroma cacao
Thecc1EG018774 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 17811291-17821290 Theobroma cacao
Thecc1EG018774 10.0kb downstream 10.0kb downstream 13547 true scaffold_4: 17797744-17811290 Theobroma cacao
Thecc1EG018774 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 17797744-17807743 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841111 5264 Brassicales-Malvales View MSA
124349458 5266 SBM View MSA
124251961 5268 Malvidae View MSA
124071046 5270 Rosid View MSA
123753389 5271 Pentapetalae View MSA
122792096 5272 Eudicot View MSA
122050177 5273 Angiosperm View MSA
121311781 5274 Embryophyte View MSA
123349031 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain