Gene : Thecc1EG018712 T. cacao v1.1
Defline:  (1 of 1) PTHR11468//PTHR11468:SF8 - GLYCOGEN PHOSPHORYLASE // ALPHA-GLUCAN PHOSPHORYLASE 1 Genomic Order:  963
Name:  ? Thecc1EG018712 Secondary Identifier:  ? PAC:27454276
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7238 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG018712 0.5kb upstream 0.5kb upstream 10805 true scaffold_4: 17408588-17419392 Theobroma cacao
Thecc1EG018712 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 17408588-17409087 Theobroma cacao
Thecc1EG018712 0.5kb downstream 0.5kb downstream 10805 true scaffold_4: 17409088-17419892 Theobroma cacao
Thecc1EG018712 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 17419393-17419892 Theobroma cacao
Thecc1EG018712 1.0kb upstream 1.0kb upstream 11305 true scaffold_4: 17408088-17419392 Theobroma cacao
Thecc1EG018712 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 17408088-17409087 Theobroma cacao
Thecc1EG018712 1.0kb downstream 1.0kb downstream 11305 true scaffold_4: 17409088-17420392 Theobroma cacao
Thecc1EG018712 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 17419393-17420392 Theobroma cacao
Thecc1EG018712 2.0kb upstream 2.0kb upstream 12305 true scaffold_4: 17407088-17419392 Theobroma cacao
Thecc1EG018712 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 17407088-17409087 Theobroma cacao
Thecc1EG018712 2.0kb downstream 2.0kb downstream 12305 true scaffold_4: 17409088-17421392 Theobroma cacao
Thecc1EG018712 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 17419393-17421392 Theobroma cacao
Thecc1EG018712 5.0kb upstream 5.0kb upstream 15305 true scaffold_4: 17404088-17419392 Theobroma cacao
Thecc1EG018712 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 17404088-17409087 Theobroma cacao
Thecc1EG018712 5.0kb downstream 5.0kb downstream 15305 true scaffold_4: 17409088-17424392 Theobroma cacao
Thecc1EG018712 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 17419393-17424392 Theobroma cacao
Thecc1EG018712 10.0kb upstream 10.0kb upstream 20305 true scaffold_4: 17399088-17419392 Theobroma cacao
Thecc1EG018712 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 17399088-17409087 Theobroma cacao
Thecc1EG018712 10.0kb downstream 10.0kb downstream 20305 true scaffold_4: 17409088-17429392 Theobroma cacao
Thecc1EG018712 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 17419393-17429392 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834148 5264 Brassicales-Malvales View MSA
124350391 5266 SBM View MSA
124253620 5268 Malvidae View MSA
124071447 5270 Rosid View MSA
123744201 5271 Pentapetalae View MSA
122788131 5272 Eudicot View MSA
122045780 5273 Angiosperm View MSA
121351120 5274 Embryophyte View MSA
123425744 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain