Gene : Thecc1EG019353 T. cacao v1.1
Defline:  (1 of 8) PTHR11206:SF87 - MATE EFFLUX FAMILY PROTEIN-RELATED Genomic Order:  1332
Name:  ? Thecc1EG019353 Secondary Identifier:  ? PAC:27453432
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG019353 0.5kb upstream 0.5kb upstream 4195 true scaffold_4: 21979191-21983385 Theobroma cacao
Thecc1EG019353 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 21979191-21979690 Theobroma cacao
Thecc1EG019353 0.5kb downstream 0.5kb downstream 4195 true scaffold_4: 21979691-21983885 Theobroma cacao
Thecc1EG019353 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 21983386-21983885 Theobroma cacao
Thecc1EG019353 1.0kb upstream 1.0kb upstream 4695 true scaffold_4: 21978691-21983385 Theobroma cacao
Thecc1EG019353 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 21978691-21979690 Theobroma cacao
Thecc1EG019353 1.0kb downstream 1.0kb downstream 4695 true scaffold_4: 21979691-21984385 Theobroma cacao
Thecc1EG019353 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 21983386-21984385 Theobroma cacao
Thecc1EG019353 2.0kb upstream 2.0kb upstream 5695 true scaffold_4: 21977691-21983385 Theobroma cacao
Thecc1EG019353 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 21977691-21979690 Theobroma cacao
Thecc1EG019353 2.0kb downstream 2.0kb downstream 5695 true scaffold_4: 21979691-21985385 Theobroma cacao
Thecc1EG019353 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 21983386-21985385 Theobroma cacao
Thecc1EG019353 5.0kb upstream 5.0kb upstream 8695 true scaffold_4: 21974691-21983385 Theobroma cacao
Thecc1EG019353 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 21974691-21979690 Theobroma cacao
Thecc1EG019353 5.0kb downstream 5.0kb downstream 8695 true scaffold_4: 21979691-21988385 Theobroma cacao
Thecc1EG019353 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 21983386-21988385 Theobroma cacao
Thecc1EG019353 10.0kb upstream 10.0kb upstream 13695 true scaffold_4: 21969691-21983385 Theobroma cacao
Thecc1EG019353 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 21969691-21979690 Theobroma cacao
Thecc1EG019353 10.0kb downstream 10.0kb downstream 13695 true scaffold_4: 21979691-21993385 Theobroma cacao
Thecc1EG019353 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 21983386-21993385 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832848 5264 Brassicales-Malvales View MSA
124346775 5266 SBM View MSA
124254486 5268 Malvidae View MSA
124070136 5270 Rosid View MSA
123747121 5271 Pentapetalae View MSA
122794225 5272 Eudicot View MSA
122042479 5273 Angiosperm View MSA
121350842 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain