Gene : Thecc1EG019205 T. cacao v1.1
Defline:  (1 of 1) PTHR10584:SF181 - PUTATIVE-RELATED Genomic Order:  1242
Name:  ? Thecc1EG019205 Secondary Identifier:  ? PAC:27451599
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-3801 Theobroma cacao pathologic  
Tcacao PWY-4101 Theobroma cacao pathologic  
Tcacao PWY-621 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG019205 0.5kb upstream 0.5kb upstream 15258 true scaffold_4: 20976142-20991399 Theobroma cacao
Thecc1EG019205 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 20976142-20976641 Theobroma cacao
Thecc1EG019205 0.5kb downstream 0.5kb downstream 15258 true scaffold_4: 20976642-20991899 Theobroma cacao
Thecc1EG019205 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 20991400-20991899 Theobroma cacao
Thecc1EG019205 1.0kb upstream 1.0kb upstream 15758 true scaffold_4: 20975642-20991399 Theobroma cacao
Thecc1EG019205 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 20975642-20976641 Theobroma cacao
Thecc1EG019205 1.0kb downstream 1.0kb downstream 15758 true scaffold_4: 20976642-20992399 Theobroma cacao
Thecc1EG019205 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 20991400-20992399 Theobroma cacao
Thecc1EG019205 2.0kb upstream 2.0kb upstream 16758 true scaffold_4: 20974642-20991399 Theobroma cacao
Thecc1EG019205 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 20974642-20976641 Theobroma cacao
Thecc1EG019205 2.0kb downstream 2.0kb downstream 16758 true scaffold_4: 20976642-20993399 Theobroma cacao
Thecc1EG019205 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 20991400-20993399 Theobroma cacao
Thecc1EG019205 5.0kb upstream 5.0kb upstream 19758 true scaffold_4: 20971642-20991399 Theobroma cacao
Thecc1EG019205 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 20971642-20976641 Theobroma cacao
Thecc1EG019205 5.0kb downstream 5.0kb downstream 19758 true scaffold_4: 20976642-20996399 Theobroma cacao
Thecc1EG019205 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 20991400-20996399 Theobroma cacao
Thecc1EG019205 10.0kb upstream 10.0kb upstream 24758 true scaffold_4: 20966642-20991399 Theobroma cacao
Thecc1EG019205 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 20966642-20976641 Theobroma cacao
Thecc1EG019205 10.0kb downstream 10.0kb downstream 24758 true scaffold_4: 20976642-21001399 Theobroma cacao
Thecc1EG019205 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 20991400-21001399 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830203 5264 Brassicales-Malvales View MSA
124337784 5266 SBM View MSA
124254064 5268 Malvidae View MSA
124069533 5270 Rosid View MSA
123742774 5271 Pentapetalae View MSA
122790590 5272 Eudicot View MSA
122045850 5273 Angiosperm View MSA
121350713 5274 Embryophyte View MSA
123424695 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain