Gene : Thecc1EG019201 T. cacao v1.1
Defline:  (1 of 47) PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) Genomic Order:  1238
Name:  ? Thecc1EG019201 Secondary Identifier:  ? PAC:27455158
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG019201 0.5kb upstream 0.5kb upstream 1934 true scaffold_4: 20955430-20957363 Theobroma cacao
Thecc1EG019201 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 20956864-20957363 Theobroma cacao
Thecc1EG019201 0.5kb downstream 0.5kb downstream 1934 true scaffold_4: 20954930-20956863 Theobroma cacao
Thecc1EG019201 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 20954930-20955429 Theobroma cacao
Thecc1EG019201 1.0kb upstream 1.0kb upstream 2434 true scaffold_4: 20955430-20957863 Theobroma cacao
Thecc1EG019201 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 20956864-20957863 Theobroma cacao
Thecc1EG019201 1.0kb downstream 1.0kb downstream 2434 true scaffold_4: 20954430-20956863 Theobroma cacao
Thecc1EG019201 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 20954430-20955429 Theobroma cacao
Thecc1EG019201 2.0kb upstream 2.0kb upstream 3434 true scaffold_4: 20955430-20958863 Theobroma cacao
Thecc1EG019201 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 20956864-20958863 Theobroma cacao
Thecc1EG019201 2.0kb downstream 2.0kb downstream 3434 true scaffold_4: 20953430-20956863 Theobroma cacao
Thecc1EG019201 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 20953430-20955429 Theobroma cacao
Thecc1EG019201 5.0kb upstream 5.0kb upstream 6434 true scaffold_4: 20955430-20961863 Theobroma cacao
Thecc1EG019201 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 20956864-20961863 Theobroma cacao
Thecc1EG019201 5.0kb downstream 5.0kb downstream 6434 true scaffold_4: 20950430-20956863 Theobroma cacao
Thecc1EG019201 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 20950430-20955429 Theobroma cacao
Thecc1EG019201 10.0kb upstream 10.0kb upstream 11434 true scaffold_4: 20955430-20966863 Theobroma cacao
Thecc1EG019201 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 20956864-20966863 Theobroma cacao
Thecc1EG019201 10.0kb downstream 10.0kb downstream 11434 true scaffold_4: 20945430-20956863 Theobroma cacao
Thecc1EG019201 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 20945430-20955429 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841052 5264 Brassicales-Malvales View MSA
124322831 5266 SBM View MSA
124254257 5268 Malvidae View MSA
124074671 5270 Rosid View MSA
123753620 5271 Pentapetalae View MSA
122797847 5272 Eudicot View MSA
122051084 5273 Angiosperm View MSA
123429186 5275 Viridiplantae View MSA
121351752 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain