Gene : Thecc1EG019128 T. cacao v1.1
Defline:  (1 of 1) PTHR22504 - REPRESSOR OF RNA POLYMERASE III TRANSCRIPTION MAF1 Genomic Order:  1194
Name:  ? Thecc1EG019128 Secondary Identifier:  ? PAC:27455580
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG019128 0.5kb upstream 0.5kb upstream 5072 true scaffold_4: 20359171-20364242 Theobroma cacao
Thecc1EG019128 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 20363743-20364242 Theobroma cacao
Thecc1EG019128 0.5kb downstream 0.5kb downstream 5072 true scaffold_4: 20358671-20363742 Theobroma cacao
Thecc1EG019128 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 20358671-20359170 Theobroma cacao
Thecc1EG019128 1.0kb upstream 1.0kb upstream 5572 true scaffold_4: 20359171-20364742 Theobroma cacao
Thecc1EG019128 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 20363743-20364742 Theobroma cacao
Thecc1EG019128 1.0kb downstream 1.0kb downstream 5572 true scaffold_4: 20358171-20363742 Theobroma cacao
Thecc1EG019128 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 20358171-20359170 Theobroma cacao
Thecc1EG019128 2.0kb upstream 2.0kb upstream 6572 true scaffold_4: 20359171-20365742 Theobroma cacao
Thecc1EG019128 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 20363743-20365742 Theobroma cacao
Thecc1EG019128 2.0kb downstream 2.0kb downstream 6572 true scaffold_4: 20357171-20363742 Theobroma cacao
Thecc1EG019128 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 20357171-20359170 Theobroma cacao
Thecc1EG019128 5.0kb upstream 5.0kb upstream 9572 true scaffold_4: 20359171-20368742 Theobroma cacao
Thecc1EG019128 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 20363743-20368742 Theobroma cacao
Thecc1EG019128 5.0kb downstream 5.0kb downstream 9572 true scaffold_4: 20354171-20363742 Theobroma cacao
Thecc1EG019128 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 20354171-20359170 Theobroma cacao
Thecc1EG019128 10.0kb upstream 10.0kb upstream 14572 true scaffold_4: 20359171-20373742 Theobroma cacao
Thecc1EG019128 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 20363743-20373742 Theobroma cacao
Thecc1EG019128 10.0kb downstream 10.0kb downstream 14572 true scaffold_4: 20349171-20363742 Theobroma cacao
Thecc1EG019128 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 20349171-20359170 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833587 5264 Brassicales-Malvales View MSA
124342068 5266 SBM View MSA
124244624 5268 Malvidae View MSA
124066988 5270 Rosid View MSA
123748418 5271 Pentapetalae View MSA
122792340 5272 Eudicot View MSA
122047316 5273 Angiosperm View MSA
121345866 5274 Embryophyte View MSA
123424535 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain