Gene : Thecc1EG019136 T. cacao v1.1
Defline:  (1 of 3) PTHR23201//PTHR23201:SF1 - EXTENSIN, PROLINE-RICH PROTEIN // GIBBERELLIN-REGULATED PROTEIN 12-RELATED Genomic Order:  1199
Name:  ? Thecc1EG019136 Secondary Identifier:  ? PAC:27455093
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG019136 0.5kb upstream 0.5kb upstream 1249 true scaffold_4: 20409214-20410462 Theobroma cacao
Thecc1EG019136 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 20409963-20410462 Theobroma cacao
Thecc1EG019136 0.5kb downstream 0.5kb downstream 1249 true scaffold_4: 20408714-20409962 Theobroma cacao
Thecc1EG019136 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 20408714-20409213 Theobroma cacao
Thecc1EG019136 1.0kb upstream 1.0kb upstream 1749 true scaffold_4: 20409214-20410962 Theobroma cacao
Thecc1EG019136 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 20409963-20410962 Theobroma cacao
Thecc1EG019136 1.0kb downstream 1.0kb downstream 1749 true scaffold_4: 20408214-20409962 Theobroma cacao
Thecc1EG019136 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 20408214-20409213 Theobroma cacao
Thecc1EG019136 2.0kb upstream 2.0kb upstream 2749 true scaffold_4: 20409214-20411962 Theobroma cacao
Thecc1EG019136 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 20409963-20411962 Theobroma cacao
Thecc1EG019136 2.0kb downstream 2.0kb downstream 2749 true scaffold_4: 20407214-20409962 Theobroma cacao
Thecc1EG019136 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 20407214-20409213 Theobroma cacao
Thecc1EG019136 5.0kb upstream 5.0kb upstream 5749 true scaffold_4: 20409214-20414962 Theobroma cacao
Thecc1EG019136 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 20409963-20414962 Theobroma cacao
Thecc1EG019136 5.0kb downstream 5.0kb downstream 5749 true scaffold_4: 20404214-20409962 Theobroma cacao
Thecc1EG019136 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 20404214-20409213 Theobroma cacao
Thecc1EG019136 10.0kb upstream 10.0kb upstream 10749 true scaffold_4: 20409214-20419962 Theobroma cacao
Thecc1EG019136 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 20409963-20419962 Theobroma cacao
Thecc1EG019136 10.0kb downstream 10.0kb downstream 10749 true scaffold_4: 20399214-20409962 Theobroma cacao
Thecc1EG019136 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 20399214-20409213 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833711 5264 Brassicales-Malvales View MSA
124344558 5266 SBM View MSA
124243413 5268 Malvidae View MSA
124069582 5270 Rosid View MSA
123752288 5271 Pentapetalae View MSA
122795520 5272 Eudicot View MSA
122051034 5273 Angiosperm View MSA
121312257 5274 Embryophyte View MSA
123349447 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain