Gene : Thecc1EG019123 T. cacao v1.1
Defline:  (1 of 2) PTHR21493//PTHR21493:SF152 - CGI-141-RELATED/LIPASE CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1189
Name:  ? Thecc1EG019123 Secondary Identifier:  ? PAC:27454400
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao LIPAS-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG019123 0.5kb upstream 0.5kb upstream 4808 true scaffold_4: 20330789-20335596 Theobroma cacao
Thecc1EG019123 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 20330789-20331288 Theobroma cacao
Thecc1EG019123 0.5kb downstream 0.5kb downstream 4808 true scaffold_4: 20331289-20336096 Theobroma cacao
Thecc1EG019123 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 20335597-20336096 Theobroma cacao
Thecc1EG019123 1.0kb upstream 1.0kb upstream 5308 true scaffold_4: 20330289-20335596 Theobroma cacao
Thecc1EG019123 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 20330289-20331288 Theobroma cacao
Thecc1EG019123 1.0kb downstream 1.0kb downstream 5308 true scaffold_4: 20331289-20336596 Theobroma cacao
Thecc1EG019123 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 20335597-20336596 Theobroma cacao
Thecc1EG019123 2.0kb upstream 2.0kb upstream 6308 true scaffold_4: 20329289-20335596 Theobroma cacao
Thecc1EG019123 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 20329289-20331288 Theobroma cacao
Thecc1EG019123 2.0kb downstream 2.0kb downstream 6308 true scaffold_4: 20331289-20337596 Theobroma cacao
Thecc1EG019123 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 20335597-20337596 Theobroma cacao
Thecc1EG019123 5.0kb upstream 5.0kb upstream 9308 true scaffold_4: 20326289-20335596 Theobroma cacao
Thecc1EG019123 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 20326289-20331288 Theobroma cacao
Thecc1EG019123 5.0kb downstream 5.0kb downstream 9308 true scaffold_4: 20331289-20340596 Theobroma cacao
Thecc1EG019123 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 20335597-20340596 Theobroma cacao
Thecc1EG019123 10.0kb upstream 10.0kb upstream 14308 true scaffold_4: 20321289-20335596 Theobroma cacao
Thecc1EG019123 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 20321289-20331288 Theobroma cacao
Thecc1EG019123 10.0kb downstream 10.0kb downstream 14308 true scaffold_4: 20331289-20345596 Theobroma cacao
Thecc1EG019123 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 20335597-20345596 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828091 5264 Brassicales-Malvales View MSA
124336785 5266 SBM View MSA
124239204 5268 Malvidae View MSA
124061291 5270 Rosid View MSA
123749324 5271 Pentapetalae View MSA
122786389 5272 Eudicot View MSA
122044867 5273 Angiosperm View MSA
121350799 5274 Embryophyte View MSA
123381889 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain