Gene : Thecc1EG019103 T. cacao v1.1
Defline:  (1 of 2) PTHR33228:SF3 - PROTEIN GLUTAMINE DUMPER 7 Genomic Order:  1174
Name:  ? Thecc1EG019103 Secondary Identifier:  ? PAC:27456251
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG019103 0.5kb upstream 0.5kb upstream 1017 true scaffold_4: 20199723-20200739 Theobroma cacao
Thecc1EG019103 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 20200240-20200739 Theobroma cacao
Thecc1EG019103 0.5kb downstream 0.5kb downstream 1017 true scaffold_4: 20199223-20200239 Theobroma cacao
Thecc1EG019103 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 20199223-20199722 Theobroma cacao
Thecc1EG019103 1.0kb upstream 1.0kb upstream 1517 true scaffold_4: 20199723-20201239 Theobroma cacao
Thecc1EG019103 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 20200240-20201239 Theobroma cacao
Thecc1EG019103 1.0kb downstream 1.0kb downstream 1517 true scaffold_4: 20198723-20200239 Theobroma cacao
Thecc1EG019103 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 20198723-20199722 Theobroma cacao
Thecc1EG019103 2.0kb upstream 2.0kb upstream 2517 true scaffold_4: 20199723-20202239 Theobroma cacao
Thecc1EG019103 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 20200240-20202239 Theobroma cacao
Thecc1EG019103 2.0kb downstream 2.0kb downstream 2517 true scaffold_4: 20197723-20200239 Theobroma cacao
Thecc1EG019103 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 20197723-20199722 Theobroma cacao
Thecc1EG019103 5.0kb upstream 5.0kb upstream 5517 true scaffold_4: 20199723-20205239 Theobroma cacao
Thecc1EG019103 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 20200240-20205239 Theobroma cacao
Thecc1EG019103 5.0kb downstream 5.0kb downstream 5517 true scaffold_4: 20194723-20200239 Theobroma cacao
Thecc1EG019103 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 20194723-20199722 Theobroma cacao
Thecc1EG019103 10.0kb upstream 10.0kb upstream 10517 true scaffold_4: 20199723-20210239 Theobroma cacao
Thecc1EG019103 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 20200240-20210239 Theobroma cacao
Thecc1EG019103 10.0kb downstream 10.0kb downstream 10517 true scaffold_4: 20189723-20200239 Theobroma cacao
Thecc1EG019103 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 20189723-20199722 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841441 5264 Brassicales-Malvales View MSA
124348420 5266 SBM View MSA
124252216 5268 Malvidae View MSA
124071582 5270 Rosid View MSA
123752792 5271 Pentapetalae View MSA
122796809 5272 Eudicot View MSA
122048439 5273 Angiosperm View MSA
121310974 5274 Embryophyte View MSA
123348338 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain