Gene : Thecc1EG019070 T. cacao v1.1

Defline:  (1 of 1) PTHR22952:SF201 - BASIC LEUCINE-ZIPPER 42-RELATED Genomic Order:  1157
Name:  ? Thecc1EG019070 Secondary Identifier:  ? PAC:27452865

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG019070 0.5kb upstream 0.5kb upstream 1317 true scaffold_4: 20028256-20029572 Theobroma cacao
Thecc1EG019070 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 20028256-20028755 Theobroma cacao
Thecc1EG019070 0.5kb downstream 0.5kb downstream 1317 true scaffold_4: 20028756-20030072 Theobroma cacao
Thecc1EG019070 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 20029573-20030072 Theobroma cacao
Thecc1EG019070 1.0kb upstream 1.0kb upstream 1817 true scaffold_4: 20027756-20029572 Theobroma cacao
Thecc1EG019070 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 20027756-20028755 Theobroma cacao
Thecc1EG019070 1.0kb downstream 1.0kb downstream 1817 true scaffold_4: 20028756-20030572 Theobroma cacao
Thecc1EG019070 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 20029573-20030572 Theobroma cacao
Thecc1EG019070 2.0kb upstream 2.0kb upstream 2817 true scaffold_4: 20026756-20029572 Theobroma cacao
Thecc1EG019070 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 20026756-20028755 Theobroma cacao
Thecc1EG019070 2.0kb downstream 2.0kb downstream 2817 true scaffold_4: 20028756-20031572 Theobroma cacao
Thecc1EG019070 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 20029573-20031572 Theobroma cacao
Thecc1EG019070 5.0kb upstream 5.0kb upstream 5817 true scaffold_4: 20023756-20029572 Theobroma cacao
Thecc1EG019070 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 20023756-20028755 Theobroma cacao
Thecc1EG019070 5.0kb downstream 5.0kb downstream 5817 true scaffold_4: 20028756-20034572 Theobroma cacao
Thecc1EG019070 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 20029573-20034572 Theobroma cacao
Thecc1EG019070 10.0kb upstream 10.0kb upstream 10817 true scaffold_4: 20018756-20029572 Theobroma cacao
Thecc1EG019070 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 20018756-20028755 Theobroma cacao
Thecc1EG019070 10.0kb downstream 10.0kb downstream 10817 true scaffold_4: 20028756-20039572 Theobroma cacao
Thecc1EG019070 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 20029573-20039572 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839713 5264 Brassicales-Malvales View MSA
124347509 5266 SBM View MSA
124245537 5268 Malvidae View MSA
124069862 5270 Rosid View MSA
123747742 5271 Pentapetalae View MSA
122794625 5272 Eudicot View MSA
122049154 5273 Angiosperm View MSA
123428996 5275 Viridiplantae View MSA
121349851 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain