Gene : Thecc1EG019501 T. cacao v1.1
Defline:  (1 of 2) PTHR33790//PTHR33790:SF1 - FAMILY NOT NAMED // PROTEIN EARLY RESPONSIVE TO DEHYDRATION 15 Genomic Order:  1435
Name:  ? Thecc1EG019501 Secondary Identifier:  ? PAC:27452722
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG019501 0.5kb upstream 0.5kb upstream 1485 true scaffold_4: 22964257-22965741 Theobroma cacao
Thecc1EG019501 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 22965242-22965741 Theobroma cacao
Thecc1EG019501 0.5kb downstream 0.5kb downstream 1485 true scaffold_4: 22963757-22965241 Theobroma cacao
Thecc1EG019501 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 22963757-22964256 Theobroma cacao
Thecc1EG019501 1.0kb upstream 1.0kb upstream 1985 true scaffold_4: 22964257-22966241 Theobroma cacao
Thecc1EG019501 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 22965242-22966241 Theobroma cacao
Thecc1EG019501 1.0kb downstream 1.0kb downstream 1985 true scaffold_4: 22963257-22965241 Theobroma cacao
Thecc1EG019501 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 22963257-22964256 Theobroma cacao
Thecc1EG019501 2.0kb upstream 2.0kb upstream 2985 true scaffold_4: 22964257-22967241 Theobroma cacao
Thecc1EG019501 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 22965242-22967241 Theobroma cacao
Thecc1EG019501 2.0kb downstream 2.0kb downstream 2985 true scaffold_4: 22962257-22965241 Theobroma cacao
Thecc1EG019501 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 22962257-22964256 Theobroma cacao
Thecc1EG019501 5.0kb upstream 5.0kb upstream 5985 true scaffold_4: 22964257-22970241 Theobroma cacao
Thecc1EG019501 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 22965242-22970241 Theobroma cacao
Thecc1EG019501 5.0kb downstream 5.0kb downstream 5985 true scaffold_4: 22959257-22965241 Theobroma cacao
Thecc1EG019501 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 22959257-22964256 Theobroma cacao
Thecc1EG019501 10.0kb upstream 10.0kb upstream 10985 true scaffold_4: 22964257-22975241 Theobroma cacao
Thecc1EG019501 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 22965242-22975241 Theobroma cacao
Thecc1EG019501 10.0kb downstream 10.0kb downstream 10985 true scaffold_4: 22954257-22965241 Theobroma cacao
Thecc1EG019501 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 22954257-22964256 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123819082 5264 Brassicales-Malvales Singleton cluster - no MSA
124315359 5266 SBM Singleton cluster - no MSA
124248566 5268 Malvidae View MSA
124070452 5270 Rosid View MSA
123742369 5271 Pentapetalae View MSA
122796171 5272 Eudicot View MSA
122048247 5273 Angiosperm View MSA
121345899 5274 Embryophyte View MSA
123380287 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain